CO2 directly modulates connexin 26 by formation of carbamate bridges between subunits
Homeostatic regulation of the partial pressure of CO2 (PCO2) is vital for life. Sensing of pH has been proposed as a sufficient proxy for determination of PCO2 and direct CO2-sensing largely discounted. Here we show that connexin 26 (Cx26) hemichannels, causally linked to respiratory chemosensitivity, are directly modulated by CO2. A ‘carbamylation motif’, present in CO2-sensitive connexins (Cx26, Cx30, Cx32) but absent from a CO2-insensitive connexin (Cx31), comprises Lys125 and four further amino acids that orient Lys125 towards Arg104 of the adjacent subunit of the connexin hexamer. Introducing the carbamylation motif into Cx31 created a mutant hemichannel (mCx31) that was opened by increases in PCO2. Mutation of the carbamylation motif in Cx26 and mCx31 destroyed CO2 sensitivity. Course-grained computational modelling of Cx26 demonstrated that the proposed carbamate bridge between Lys125 and Arg104 biases the hemichannel to the open state. Carbamylation of Cx26 introduces a new transduction principle for physiological sensing of CO2.https://doi.org/10.7554/eLife.01213.001
A number of gaseous molecules, including nitric oxide and carbon monoxide, play important roles in many cellular processes by acting as signalling molecules. Surprisingly, however, it has long been assumed that carbon dioxide – a gaseous molecule that is produced during cellular metabolism – is not a signalling molecule.
Controlling the concentration of carbon dioxide (CO2) in a biological system is essential to sustain life, and it was thought that the body used pH – which is the concentration of hydrogen ions – as a proxy for the level of CO2. The concentration of CO2 is related to pH because CO2 reacts with water to form carbonic acid, which quickly breaks down to form hydrogen ions and bicarbonate ions. This close relationship has led many researchers to equate pH-sensing with CO2-sensing, and to suggest that a physiological receptor for CO2 does not exist.
Recent research into structures called connexin hemichannels has challenged this view. Researchers found that when pH levels were held constant, increasing the level of CO2 caused the structures to open up, suggesting that CO2 could be directly detected by the hemichannels. Each hemichannel contains six connexin subunits, but the details of how the CO2 molecules interact with the individual connexin subunits to open up the hemichannels remained mysterious.
Now Meigh et al. show that CO2 molecules bind to a specific amino acid (lysine) at a particular place (residue 125) in one of the connexin subunits to form a carbamate group. This group then interacts with the amino acid (arginine) at residue 104 in a neighbouring connexin subunit to form a carbamate bridge between the two subunits. This leads to structural changes that cause the gap junction hemichannels to open and release signals that can activate other cells. Since connexin hemichannels are found throughout the human body, these results suggest that CO2 might act as a signalling molecule in processes as diverse as the control of blood flow, breathing, hearing and reproduction.https://doi.org/10.7554/eLife.01213.002
CO2 is the unavoidable by-product of cellular metabolism. Humans produce approximately 20 moles of CO2 per day (Marshall and Bangert, 2008). The dissolved CO2 can readily combine with water, aided by carbonic anhydrase, to form H2CO3, which dissociates rapidly to H+ and HCO3−. In any physiological solution therefore, the partial pressure of CO2 (PCO2) will be in equilibrium with, and inescapably related to, the pH and the concentration of HCO3− of that solution. Regulation of PCO2 is thus a vital homeostatic function that is linked to acid-base balance.
As might be expected, chemosensory reflexes regulate the frequency and depth of breathing to ensure homeostatic control of blood gases. The field of respiratory chemosensitivity has been dominated by ‘reaction theory’ which posits that pH is a sufficient signal for detection of changes in PCO2 (Loeschcke, 1982). Many investigators therefore equate pH-sensing with CO2-sensing. There are several areas of the medulla oblongata which contain neurons that respond to changes in pH/CO2, especially near the highly vascularised ventral surface. For example a population of neurons highly sensitive to pH/CO2 have been described in the retrotrapezoid nucleus (RTN) (Mulkey et al., 2004, 2006; Guyenet et al., 2008) and the medullary raphé nucleus (Richerson, 2004; Ray et al., 2011). Despite the acceptance of pH-sensing as the predominant mechanism by which PCO2 is measured, there is substantial evidence for an additional and independent effect of molecular CO2 (Eldridge et al., 1985; Shams, 1985; Huckstepp and Dale, 2011). For example, if pH is carefully controlled at the medullary surface, an increase in PCO2 at constant pH will still enhance breathing by as much as a pH change at constant PCO2 (Shams, 1985). We have recently shown that connexin 26 (Cx26) hemichannels, open in response to increases in PCO2 at constant extracellular pH and are an important conduit for the CO2-dependent, as opposed to pH-dependent, release of ATP (Huckstepp et al., 2010a). Cx26 hemichannels contribute to the chemosensory control of breathing (Huckstepp et al., 2010b; Wenker et al., 2012). Hemichannels of two closely related connexins, Cx30 and Cx32, also exhibited CO2-sensitive opening (Huckstepp et al., 2010a). Despite this evidence, widespread acceptance of direct sensing of CO2 requires a detailed molecular explanation of any putative transduction system.
One possible way that CO2 can interact with proteins is via carbamylation—the formation of a covalent bond between the carbon of CO2 and a primary amine group. For example, CO2 forms carbamate bonds with haemoglobin (Kilmartin and Rossi-Bernardi, 1971) and the plant enzyme RuBisCo (Lundqvist and Schneider, 1991). Here we document an important new advance—the mechanism by which CO2 binds directly to Cx26, most probably via carbamylation of a lysine residue, to cause hemichannel opening. Our work establishes a new field of direct CO2 sensing that can be mediated by CO2-dependent carbamylation of certain β connexins. As these are widely distributed in the brain and other tissues, it is likely that direct detection of CO2 via this mechanism is important in many different physiological processes.
We have previously demonstrated that Cx26, and two related β connexins, Cx30 and Cx32, open when exposed to modest increases in PCO2 at constant pH (Huckstepp et al., 2010a). This previous study demonstrated, in inside-out and outside-out excised membrane patches at a transmembrane potential of −40 mV, that Cx26 hemichannel gating respectively increased and decreased in response to increases and decreases of PCO2. To reconfirm our previous findings that Cx26, and not some other hemichannel senses CO2 (Huckstepp et al., 2010a), we demonstrated that the CO2-dependent dye loading of HeLa cells expressing Cx26 was blocked by 100 µM carbenoxolone, but unaffected by 1 mM probenecid, a blocker of pannexin-1, (Silverman et al., 2008), and 20 µM ruthenium red, a blocker of calhm1 (Taruno et al., 2013), (Figure 1—figure supplement 1). Parental HeLa cells do not exhibit CO2-dependent dye loading demonstrating that the heterologous expression of Cx26 is essential for this function (Huckstepp et al., 2010a) (Figure 3—figure supplement 1).
The extent of CO2 chemosensitivity within the β connexins
To document the extent to which this sensitivity to CO2 is limited within the β connexin family (Figure 1F), and to form the basis of a bioinformatic comparison to identify possible CO2 binding motifs, we investigated whether another β connexin, Cx31, might also be sensitive to CO2. We expressed, in HeLa cells, either rat Cx31 or rat Cx26 tagged at the C-terminal with mCherry and used a previously described dye loading assay (Huckstepp et al., 2010a) to test whether the cells could load with carboxyfluorescein (CBF) in a CO2-dependent manner. As expected from our previous work, HeLa cells expressing the Cx26 readily loaded with CBF when exposed to this dye in the presence of elevated PCO2 (55 mmHg, at pH 7.5, Figure 1A,B). However, HeLa cells expressing Cx31 failed to dye load in a CO2-dependent manner (Figure 1A,B). As the connexins were tagged with mCherry, we could verify the presence of fluorescent puncta in both the Cx26 and Cx31 expressing HeLa cells (Figure 1—figure supplement 2). To check for the existence of functional hemichannels in the Cx31-expressing HeLa cells, we removed extracellular Ca2+ as a positive control. This manipulation will open all types of connexin hemichannel. Parental HeLa cells do not load with dye when Ca2+ is removed from the medium (Figure 3—figure supplement 1); they therefore possess virtually no endogenous hemichannels. The removal of extracellular Ca2+ readily caused loading of CBF into the Cx31-expressing HeLa cells (Figure 1A, inset), demonstrating the presence of functional Cx31 hemichannels.
Identification of a carbamylation motif in CO2 sensitive β connexins
The CO2-sensitivity in the β connexins therefore appears to be limited to the three closely related connexins, Cx26, Cx30 and Cx32, and Cx31 has no sensitivity to increases in PCO2 (Figure 1F). We hypothesized that CO2 carbamylated a lysine residue in Cx26 to induce conformational change and hence opening of the hemichannel. We therefore compared the sequences of the three CO2-sensitive connexins to Cx31 to identify a lysine present in all three CO2 sensitive connexins but absent from Cx31 (Figure 1C). This analysis revealed K125 and four further amino acids as forming a motif that was absent from Cx31. The existing crystal structure for Cx26 (Maeda et al., 2009), shows that K125 is at the end of an alpha helix and that the sequence KVREI (‘carbamylation motif’) orients K125 towards R104 on the neighbouring subunit (Figure 1D). The distance from K125 to R104 is only 6.5 Å (Maeda et al., 2009), strongly suggesting that if K125 were to be carbamylated it could form a salt bridge between these two residues in adjacent subunits (Figure 1E). Interestingly, R104 is present in Cx30, but conservatively substituted by a lysine residue in Cx32 (Figure 1C), which has a lower sensitivity to CO2 than Cx26 (Huckstepp et al., 2010a).
Insertion of the carbamylation motif into Cx31 creates a CO2-sensitive mutant hemichannel
Our analysis predicts that if we were to introduce the putative carbamylation-motif of Cx26 into Cx31, the resulting mutant Cx31 (mCx31) should be sensitive to CO2 as the lysine introduced into the sequence should be able to form a salt bridge with the native residue K104 in mCx31 once carbamylated (Figure 1C–E and 2A). We therefore made mCx31 in which the motif TQKVREI was introduced in place of K123H124 of the native connexin (Figure 2A). This insertion/substitution maintained the correct orientation of the K125 with respect to K104 of Cx31. HeLa cells expressing mCx31 displayed clear CO2-dependent dye loading (Figure 2B,C). We confirmed the CO2 sensitivity of mCx31 expressing HeLa cells by performing whole cell patch camp recordings. mCx31-expressing cells exhibited a conductance change of 3.3 ± 0.84 nS (mean ± SEM, n = 8, Supplementary file 1) when exposed to elevated PCO2 (Figure 2D). Cells, expressing wild type Cx31 showed no CO2-dependent changes in their whole cell conductance (mean conductance change −0.002 ± 0.023 nS, n = 6, Supplementary file 1, Figure 2D).
K125 and R104 are essential for CO2 sensitivity
To demonstrate that K125 is the key residue for interaction with CO2, we made mCx31K125R, by inserting TQRVREI into Cx31 in place of K123H124. Unlike lysine, the arginine side chain cannot be carbamylated by CO2 as its pKa (12.5) is much higher than that of lysine (10.5), therefore this variant should have no sensitivity to CO2. mCx31K125R did indeed lack sensitivity to CO2 (Figure 3A–C, Figure 3—source data 1). This was not because the mutant channel failed to assemble correctly, as the positive control of zero Ca2+ dye loading demonstrated the presence of functional hemichannels (Figure 3A, Figure 3—figure supplement 1). Next we investigated the relevant residues in Cx26 itself. The carbamate bridge that we propose must involve K125 (being carbamylated) and R104 (forming the salt bridge with the carbamylated lysine). We therefore made mutations that individually disrupted both of these functions: K125R to prevent carbamylation, and R104A to disrupt formation of the salt bridge. Neither Cx26K125R nor Cx26R104A exhibited sensitivity to CO2 sensitivity. Nevertheless the positive controls demonstrated the presence of functional mutant hemichannels in the expressing HeLa cells (Figure 3A, Figure 3—figure supplement 1).
Figure 3—source data 1
Engineering an analogue of the carbamylated lysine into Cx26 makes it constitutively open
To test further our prediction that the carbamylated K125 forms a salt bridge with R104, we made the mutation K125E in Cx26. The insertion of glutamate in place of the lysine has the potential to act as an analogue of the carbamylated K125. If our hypothesis is correct, this mutated channel should be constitutively open, as the carboxyl group of the E125 should be able to form a salt bridge with R104. We found that HeLa cells expressing Cx26K125E readily loaded with dye under control conditions and exhibited no sensitivity to CO2 (Figure 4). The Cx26K125E-expressing HeLa cells showed much greater loading under control conditions than parental HeLa cells (Figure 4, Figure 4—source data 1). To further confirm that the constitutive dye loading occurred via the misexpressed connexin, we demonstrated that carbenoxolone (100 µM) completely blocked CO2-dependent dye loading in HeLa cells expressing Cx26K125E (Figure 4, Figure 4—source data 1).
Figure 4—source data 1
Reasoning that if bridge formation between subunits was key to opening the hemichannel, we also made the further mutation R104E. In the mutated channel E104 has the potential to form a salt bridge in the reverse direction with K125 and we predicted that if this were to happen such a mutant hemichannel should also be constitutively open. We found that HeLa cells expressing Cx26R104E did indeed load with dye under control conditions and that this enhanced dye loading was blocked with carbenoxolone (Figure 5, Figure 5—source data 1).
Figure 5—source data 1
Elastic network model of Cx26 shows that carbamylation leads to hemichannel opening
Although our experimental data point to the importance of carbamylation of K125 and the formation of a salt bridge to R104 in the adjacent subunit, it is not clear how this would lead to opening of the Cx26 hemichannel. Course-grained modelling reduces protein atomistic complexity for more efficient computational studies of harmonic protein dynamics and is particularly suited to examining hemichannel opening over millisecond time scales (Sherwood et al., 2008). We therefore built coarse-grained elastic network models (ENM) to gain insight into the mechanism by which CO2 maintains Cx26 in the open state. In an ENM the Cα-atom co-ordinates of an atomic resolution structure are used to represent a protein structure. The total global protein motion within the ENM consists of a defined number of modes, each of a characteristic frequency and representing a particular harmonic motion within the protein. ENMs are known to reproduce the global low frequency modes of protein motion well in comparison to experimental data (Delarue and Sanejouand, 2002; Valadie et al., 2003). We used the co-ordinates from a high-resolution crystal structure to construct an ENM (Tirion, 1996) for the Cx26 hexamer in the unbound and CO2-bound states. CO2 was represented in the ENM by the inclusion of six additional Hookean springs between residues K125 and R104 of neighbouring monomers (Figure 6A).
Analysis of the model revealed that in the absence of CO2 the lowest frequency mode (mode 1) represented an opening/closing motion that was able to fully occlude the hemichannel central pore (Video 1). Addition of springs representing CO2-binding to the ENM restricted the closing motions of the hemichannel and thus connexin 26 was maintained in the open state (Video 2). We examined the overlap in the ordering of the modes in the unbound and CO2 bound states to gain insight into how this occurs. A significant reordering of the lowest frequency modes to higher frequencies was observed in the presence of CO2 rather than the removal of any modes from the total protein motion (Figure 6B). Mode 1, the lowest frequency mode that represents the opening/closing mode, represented about 40% of the total protein motion in the absence of CO2. In the presence of CO2 this closing mode is reordered through a change in its frequency as mode 9, which accounts for only about 2% of the total motion (Figure 6B,C). CO2 therefore opens Cx26 through a reordering of the normal modes of global protein motion such that the normal closing motion of Cx26 no longer significantly contributes to the total motion of the hemichannel. We infer from this that the carbamate bridge formed between Cx26 monomers represents a constraining force that hinders hemichannel closure.
Evidence from six different experimental tests supports our hypothesis that CO2 forms a carbamate bridge between K125 and R104 on the adjacent subunit to open the Cx26 hemichannel. Firstly, we demonstrated the sufficiency of the carbamylation motif to confer CO2 sensitivity by inserting it into a CO2-insensitive connexin, Cx31. Secondly, we showed that K125 of the carbamylation motif was essential for this motif to confer CO2 sensitivity on Cx31. Thirdly and fourthly, we demonstrated that the mutations K125R and R104A in Cx26 (to prevent carbamate bridging at either end of the bridge) destroyed the CO2 sensitivity of this connexin. Fifthly, by exploiting glutamate as an analogue of the carbamylated K125 (in Cx26K125E), we demonstrated a gain of function—Cx26K125E was constitutively open, yet had lost sensitivity to CO2. Finally, we further tested the bridging concept by demonstrating that the bridge is in effect bidirectional: the mutated hemichannel Cx26R104E, in which E104 can bridge to K125 in the reverse direction, was also constitutively open, but had no sensitivity to CO2.
Although we have not directly demonstrated CO2 binding to Cx26, our extensive testing of this hypothesis through selective mutations leads us to conclude that CO2 interacts with Cx26 directly and that no other protein is required for CO2 sensitivity. This interaction is most probably via carbamylation of K125. Interestingly, the mutations Cx26K125E and Cx26K125R can be considered respectively as open-state and closed-state analogues of the wild type channel. Collectively, our data strongly suggests that CO2 binds to the intracellular surface of Cx26 and must therefore cross the membrane to reach this site. This could occur either direct diffusion through the membrane bilayer, potentially via Cx26 itself, or via other CO2 permeable channels (Boron et al., 2011). Amongst its many other functions, Cx26 can therefore be regarded as a receptor for CO2. Interestingly, this mechanism of modulation applies to both Cx30 and Cx32, which can both potentially form a carbamate bridge at equivalent residues to Cx26. In the case of Cx32 this would involve bridging to K104 rather than R104 (in Cx26 and 30). Cx26 can co-assemble with both Cx30 and Cx32 to form heteromeric hemichannels (Forge et al., 2003; Yum et al., 2007). Our structural studies predict that, as Cx30 and Cx32 have K125 and either R104 or K104, carbamate bridges could form in such heteromeric hemichannels and that they should also therefore be CO2-sensitive.
Carbamylation involves formation of a labile covalent bond between the carbon of CO2 and a primary amine. For this to occur the amine must be in a restricted hydration space so that it is not protonated. Some examples of physiologically significant carbamylation are known. The carbamylation of the N-terminal amines of haemoglobin contributes to the Bohr effect (Kilmartin and Rossi-Bernardi, 1971), whereby the affinity of haemoglobin for O2 is reduced in the presence of elevated CO2. However in mammalian systems no other examples of carbamylation by CO2 have been described. In C3 photosynthetic plants, the enzyme RuBisCo, that participates in the Calvin cycle and carbon fixation is activated by carbamylation of a specific lysine residue (Lundqvist and Schneider, 1991). Several microbial enzymes are also carbamylated (Maveyraud et al., 2000; Golemi et al., 2001; Young et al., 2008).
Despite this precedent, the functional significance of CO2-carbamylation and its potential as a transduction principle for the measurement of CO2 has been almost completely overlooked in vertebrate physiology. The mechanism of formation of a salt bridge between a carbamylated lysine and an appropriately oriented arginine on the neighbouring subunit is a unique mechanism for modulation of an ion channel and establishes carbamylation as a mechanistic basis for the direct signalling of PCO2 in mammalian physiology. This carbamylation of a lysine to transduce the concentration of CO2 into a biological signal is somewhat equivalent to the nitrosylation of a cysteine residue by NO/nitrite. It establishes a CO2-dependent signalling paradigm in which the concentration of CO2 is signalled by ATP release via Cx26 from the chemosensory cell and consequent activation of neighbouring cells, or potentially by a Ca2+ influx through the Cx26 hemichannel (Fiori et al., 2012) to initiate a Ca2+ wave within the chemosensory cell itself and further Ca2+-dependent signalling processes.
Materials and methods
Hemichannel expression and mutagenesisRequest a detailed protocol
All connexin genes except Cx26R104A, Cx26K125E and Cx26R104E were synthesised by Genscript USA and subcloned into the pCAG-GS mCherry vector. The sequence for wild type Cx26 and Cx31 genes were respectively take from accession numbers NM_001004099.1 and NM_019240.1. To produce Cx26R104A, Cx26K125E and Cx26R104E site directed mutagenesis was performed using Quikchange II site directed mutagenesis kit. All wild type and mutant genes were sequenced to verify that the correct sequence was present. Hela cells were maintained in Dulbecco’s modified Eagle’s medium (DMEM) (Sigma-Aldrich Company Ltd, Gillingham, UK), 10% FCS (Biosera Europe, Labtech International Ltd, Uckfield, UK), 1:1000 pen/strep and supplemented with 3 mM CaCl2. Cells were grown in a humidified 5% CO2 incubator at 37°C. The connexin proteins were expressed via transient transfection. Cells were plated in six-well plates at 1 × 105 cells per well for Cx26 and its mutants and 5 × 104 cells per well for Cx31 and its mutants. Following the GeneJuice transfection reagent (Merck-Millipore UK, Merck KGaA, Darmstadt, Germany) user protocol, cells were transfected with 1 µg of the appropriate DNA. Experiments were performed when the connexin proteins had reached the cell membrane. This was found to be approximately 2 days for Cx26 and its mutants and approximately 3 days for Cx31 and its mutants.
Standard artificial cerebrospinal fluid (aCSF, normocapnic)Request a detailed protocol
124 mM NaCl, 3 mM KCl, 2 mM CaCl2, 26 mM NaHCO3, 1.25 mM NaH2PO4, 1 mM MgSO4, 10 mM D-glucose saturated with 95% O2/5% CO2, pH 7.5, PCO2 35 mmHg.
50 mM HCO3− aCSF (isohydric hypercapnic)Request a detailed protocol
100 mM NaCl, 3 mM KCl, 2 mM CaCl2, 50 mM NaHCO3, 1.25 mM NaH2PO4, 1 mM MgSO4, 10 mM D-glucose, saturated with 9% CO2 (with the balance being O2) to give a pH of 7.5 and a PCO2 of 55 mmHg respectively.
Dye loading assay and image analysisRequest a detailed protocol
Connexin expressing HeLa cells were plated on cover slips. A coverslip was placed in a small flow chamber and the cells were exposed to either: control aCSF with 200 µM carboxyfluorescein for 10 min; isohydric hypercapnic aCSF with 200 µM carboxyfluorescein for 10 min; or zero Ca2+, 1 mM EGTA-containing aCSF plus 200 µM carboxyfluorescein for 10 min. This was followed by control aCSF plus 200 µM carboxyfluorescein for 5 min and then thorough washing for 30 min with control aCSF. These protocols are summarized in Figure 7.
The cells were then imaged by epifluorescence (Scientifica Slice Scope (Scientifica Ltd, Uckfield, UK), Cairn Research OptoLED illumination (Cairn Research Limited, Faversham, UK), 60x water Olympus immersion objective, NA 1.0 (Scientifica), Hamamatsu ImageEM EMCCD camera (Hamamatsu Photonics K.K., Japan), Metafluor software (Cairn Research)). Using ImageJ, the extent of dye loading was measured by drawing a region of interest (ROI) around individual cells and calculating the mean pixel intensity for the ROI. The mean pixel intensity of the background fluorescence was also measured in a representative ROI, and this value was subtracted from the measures obtained from the cells. All of the images displayed in the figures reflect this procedure in that the mean intensity of the pixels in a representative background ROI has been subtracted from every pixel of the image. At least 40 cells were measured in each condition, and the mean pixel intensities plotted as cumulative probability distributions.
For the dye loading experiments, the median pixel intensities of the control and CO2 dye loading conditions (minimum of five independent repetitions) were compared by a Kruskal Wallace ANOVA and pairwise comparions by the Mann-Whitney test. The false discovery rate procedure (Curran-Everett, 2000) was used to determine whether the multiple pairwise comparisons remained significant.
Patch clamp recordingsRequest a detailed protocol
Cover slips containing non-confluent cells were placed into a perfusion chamber at 28°C in sterile filtered standard aCSF. Standard patch clamp techniques were used to make whole-cell recordings. The intracellular fluid in the patch pipette contained: K-gluconate 120 mM, CsCl 10 mM, TEACl 10 mM, EGTA 10 mM, ATP 3 mM, MgCl2 1 mM, CaCl2 1 mM, sterile filtered, pH adjusted to 7.2 with KOH. All whole-cell recordings were performed at a holding potential of −40 mV with regular steps of 5 s to −50 mV to assess whole-cell conductance.
Elastic network model–course-grained simulationsRequest a detailed protocol
Elastic network model (ENM) simulations were performed based on its regular implementation using pdb file 2ZW3, where all the Cα atoms in the protein within a given cut-off radius are joined with simple Hookean spring (Tirion, 1996; Rodgers et al., 2013a). The spring constants were set to a constant value of 1 kcal mol−1 Å−2 with a cut-off radius of 8 Å. The presence of CO2 molecules were represented in the ENM by the inclusion of an additional Hookean spring between residues K125 and R104 of each set of neighbouring monomers (Rodgers et al., 2013b). The first six modes, that is the lowest frequency modes, represent the solid body translational and rotational motions of the protein and are thus ignored from the analysis.
Structure of the connexin 26 gap junction channel at 3.5 A resolutionID 2ZW3. Publicly available at RCSB Protein Data Bank (http://www.rcsb.org).
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Richard AldrichReviewing Editor; The University of Texas at Austin, United States
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Thank you for sending your work entitled “CO2 directly modulates connexin 26 by formation of carbamate bridges between subunits” for consideration at eLife. Your article has been favorably evaluated by a Senior editor and 2 reviewers, along with a member of our Board of Reviewing Editors.
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The observations in the manuscript by Meigh et al. are highly novel and represent a new way in which we can look at the body's ability to sense CO2. The involvement of connexin hemichannels in this process is particularly novel. The data presented to implicate direct carbamylation of the connexin protein (at K125 in Cx26) are compelling, given that CO2 induced opening of hemichannels is eliminated using mutants at this site, and can be introduced into a non-CO2 sensitive Cx31 by inserting the target sequence.
However, the authors conclude strongly that: (1) the carbamylation of Cx26 (and presumably the other CO2 sensitive connexins) leads directly to opening of hemichannels, and that, (2) this is caused by formation of a salt bridge with R104. The data for both these claims is currently inadequate.
With respect to (1), the authors do show that the increased membrane conductance and dye uptake are dependent on Cx expression. Thus, Cx hemichannels are a likely candidate to explain the leak, but other channels like Pannexins, or more recently, the CALHM channels, could similarly cause this conductance and dye permeability increase. Ca2+ block of this conductance is shown, but this is not very specific, and the authors do not show that it is reversible.
More definitive evidence that connexin hemichannels cause the leak is necessary. This should be easy to obtain by simply doing some single channel patch recordings, where Cx hemichannels are readily distinguished from Pnx1 channels. This would also allow the authors to determine if the changes in conductance really reflect enhanced open probability (as they conclude in the absence of evidence), or possibly as a result of enhanced trafficking or other changes. Different pharmacological blockers like La+++ that are specific for connexins could also be used to distinguish connexin hemichannels from other candidates.
With respect to (2), this is based on structural models of Cx26, at regions that are not well resolved in the original diffraction pattern. It is supported by one R104A mutant that disrupts CO2 gating. But mutants that ablate function are not very instructive, as this could be for many reasons. The authors could also test an R104K mutant that one might expect to retain at least partial function, if it is dependent on a salt bridge as proposed by the authors.
Carbamylation to control activity is well known. Rubisco is the best example but there are others such the beta lactamases as cited by the authors. This is mentioned in the Discussion. Carbamylation is the central theme of this paper and must be initially brought up in the Introduction.
In citing their past work where connexins 30 and 32 open in response to CO2 with constant pH, that constant pH is extracellular. Admittedly the bulk evidence supports a direct role of pCO2 and not a pH change with the increase in CO2, these experiments do not incisively rule out an intracellular pH effect.
In the opening of the discussion the authors state:
“Our analysis has demonstrated that CO2 binds to the intracellular surface of Cx26 and must therefore diffuse through the membrane to reach this site.”
Direct binding was not demonstrated. This is the most serious weakness in the paper. The experiments as designed are excellent but the authors stop short of the most critical molecular detail.
The definitive proof of a carbamoylated connexin structure is no doubt what the authors would like and so would we. 14C-CO2 binding in WT and mutants should be clear. And easy. The authors need to show binding with 14CO2 and/or the unique NMR signal generated with 13CO2.
Together, the electrophysiological and binding experiments would allow the authors to be more secure in their conclusions, which at this point are more speculative than presented in the manuscript.https://doi.org/10.7554/eLife.01213.019
1) The identity of the hemichannel underlying the conductance change and dye permeation – in particular reassurance that this is due to the misexpression of Cx26 rather than some other endogenous conductance (such as pannexin1 and calhm1). There was also a request for single channel recordings.
We published data to this effect in Huckstepp et al. 2010 J Physiol 588, 3901 and Huckstepp et al. 2010, J Physiol 588, 3921. In the first of these papers we demonstrated that CO2-dependent ATP release from the medulla was blocked by a number of agents active at connexin hemichannels (carbenoxolone at high concentration, proadifen, NPPB and Co2+), but not by agents selective for pannexin-1 (carbenoxolone at low concentration and probenecid). In the second of these papers we demonstrated that the whole cell conductance change in responses to changes in PCO2 were accompanied an increase in current noise (indicative of increased channel gating) and also performed single channel recordings in isolated membrane patches from Cx26-epxressing HeLa cells in the inside-out and outside-out configurations. These recordings demonstrated that increasing and decreasing PCO2 respectively increased and decreased single channel gating in both configurations of the isolated patches at a membrane potential of -40 mV (which would by itself rule out panx-1, as this hemichannel requires membrane depolarization to open).
However at the time we were unaware of the existence of calhm1, so did not specifically test whether this hemichannel could be involved. We therefore provide additional data, in a new supplement to Figure 1, to demonstrate the block of CO2-dependent dye loading by carbenoxolone (not active at calhm1, Taruno et al. 2013 Nature doi: 10.1038/nature11906), and a corresponding lack of effect of probenecid (to repeat earlier findings ruling out Panx-1) and ruthenium red (active at calhm1). These data show that only carbenoxolone prevents the CO2-dependent dye loading of the HeLa cells and thus rule out these alternative possibilities. We have also made more complete reference to our earlier work in the initial section of the results to address the issues of hemichannel identity and single channel conductances.
We also thought it would be helpful to show in and additional supplement to Figure 1 examples of the mCherry expression patterns for selected mutant and WT connexins.
2) Direct binding of CO2 to the hemichannel has not been demonstrated, and the evidence supporting the bridge is weak.
It is true that we have not directly shown the binding of CO2 to Cx26, and the demonstration of such would be highly desirable. Unfortunately we do not think that either alternative proposed by the reviewers is practicable owing to the large amount of protein required.
14CO2 binding typically requires 80 nmol of protein per single technical replicate (J Biol Chem  254, 5599-601) corresponding to just over 2 mg of Cx26 released from membranes (typically up to 10% of total expressed and purified Cx26 – J Cell Biol  115, 141-50). This corresponds to about 20 mg of protein for 3 biological replicates with 3 technical replicates each. The total protein required would be considerably more with method development. Given that HeLa cells express only low amounts of connexin protein, this approach is therefore unfeasible for Cx26 with the expression systems we have currently available to us. Similarly, large amounts of protein are required for 13C-NMR (62.5 mg/ml protein BBRC  111, 544; 0.5 mM protein J Biol Chem (1976) 251, 477 and (1977) 252, 2234; 70 mg/ml protein Proc Natl Acad Sci  76, 673), even allowing for the increased sensitivity modern machines.
However, we have given further thought as to how we could provide further evidence to support both the concept of CO2 binding and the concept of the carbamate bridge that the reviewers correctly point out is supported by only a single mutation. We reasoned that we could in effect “engineer in” the binding of CO2 by replacing K125 with a glutamate residue. The carboxy side chain of glutamate has the potential to provide the same functionality as the carbamylated lysine and could thus form a salt bridge with R104. We would predict that such a channel (Cx26K125E) should be both constitutively open and no longer sensitive to CO2. We now present evidence that both these predictions are true and that Cx26125E can be regarded as an analogue of the open, carbamylated hemichannel.
The suggestion that we test the mutant R104K is a good one. However in our gain of function mutant, mCx31, the other end of the bridge is K104 and the mutation R104K in Cx26 would give relatively little further information as we already know that a lysine at this position can substitute for the arginine. As an alternative approach, it struck us that we could provide further support for the idea of the bridge between K125 and R104 simply by reversing the direction of the bridge. The mutation R104E provides the required carboxy functionality from residue 104 and it should, on the basis of our hypothesis, be able to form a salt bridge in the reverse direction with K125 and thus also give a constitutively open hemichannel. We now provide evidence that Cx26R104E is also constitutively open, and no longer sensitive to CO2.
We summarize these new data for Cx26K125E and Cx26R104E in Figures 4 and 5. We have amended the Discussion to the effect that we have not demonstrated direct binding of CO2, but that 6 experimental tests derived from the hypothesis of CO2 binding (gain of function in mCx31, loss of function in mCx31K125R, loss of function in Cx26K125R, loss of function in Cx26R104A, gain of function in Cx26K125E, and gain of function in Cx26R104E) provide results that strongly support this hypothesis.
3) Carbamylation is the central theme of this paper and must be initially brought up in the Introduction.
We now introduce the concept of carbamylation in the Introduction.
4) Intracellular pH – a possible contributor?
Our previous work in the 2010 papers leaves very little room for intracellular pH changes as the causation of the hemichannel gating or CO2-dependent ATP release via Cx26. Perhaps the strongest evidence from this previous work is that isolated membrane patches in both inside out or outside out configuration exhibit changes in channel gating under conditions of constant bath pH (Huckstepp et al. 2010, J Physiol 588, 3921). Our new data, especially the observation that K125E and R104E mutants are both constitutively open and lack CO2 sensitivity, makes the concept of pH changes underlying the CO2-dependent channel gating even less likely. We have opted not to add any discussion of this in the paper.https://doi.org/10.7554/eLife.01213.020
Article and author information
Medical Research Council (G1001259)
- Nicholas Dale
Biotechnology and Biological Sciences Research Council
- Louise Meigh
Engineering and Physical Sciences Research Council (EP/H051759/1)
- Thomas L Rodgers
- Martin J Cann
The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.
- Richard Aldrich, The University of Texas at Austin, United States
- Received: July 10, 2013
- Accepted: October 8, 2013
- Version of Record published: November 12, 2013 (version 1)
© 2013, Meigh et al.
This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.
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