A novel acidification mechanism for greatly enhanced oxygen supply to the fish retina

  1. Christian Damsgaard  Is a corresponding author
  2. Henrik Lauridsen
  3. Till S Harter
  4. Garfield T Kwan
  5. Jesper S Thomsen
  6. Anette MD Funder
  7. Claudiu T Supuran
  8. Martin Tresguerres
  9. Philip GD Matthews
  10. Colin J Brauner
  1. Department of Zoology, University of British Columbia, Canada
  2. Department of Clinical Medicine, Aarhus University, Denmark
  3. Scripps Institution of Oceanography, UC San Diego, United States
  4. Department of Biomedicine, Aarhus University, Denmark
  5. Department of Forensic Medicine, Aarhus University, Denmark
  6. Università degli Studi di Firenze, Neurofarba Department, Sezione di Scienze Farmaceutiche, Italy

Abstract

Previously, we showed that the evolution of high acuity vision in fishes was directly associated with their unique pH-sensitive hemoglobins that allow O2 to be delivered to the retina at PO2s more than ten-fold that of arterial blood (Damsgaard et al., 2019). Here, we show strong evidence that vacuolar-type H+-ATPase and plasma-accessible carbonic anhydrase in the vascular structure supplying the retina act together to acidify the red blood cell leading to O2 secretion. In vivo data indicate that this pathway primarily affects the oxygenation of the inner retina involved in signal processing and transduction, and that the evolution of this pathway was tightly associated with the morphological expansion of the inner retina. We conclude that this mechanism for retinal oxygenation played a vital role in the adaptive evolution of vision in teleost fishes.

Introduction

The retina of vertebrates, containing the light-sensitive photoreceptors required for visual perception, has a very high metabolic rate that must be supported by an adequate supply of O2 (Linsenmeier and Braun, 1992). To support such a high O2 demand, most tissues possess a dense network of capillaries that minimize diffusion distances, facilitating the transfer of O2 from the red blood cells (RBCs) to the respiring mitochondria. However, pigmented RBCs in capillaries on the vitreous side of the retina scatter incoming light and absorb photons before they reach the photoreceptors (Buttery et al., 1991; Chase, 1982; Country, 2017; Damsgaard et al., 2019; Yu and Cringle, 2001). The result may be an impairment of visual acuity, which may explain why only the choroidal vessels lining the back of the retina (also called the choriocapillaris) perfuse the retinae of most vertebrates (Country, 2017) (see Figure 1 for retinal anatomy). The combination of a high O2 demand and limited O2 diffusion associated with this anatomical arrangement introduces a tradeoff between retinal O2 supply and visual performance common to all vertebrates (Damsgaard et al., 2019). Thus, any evolutionary increase in retinal thickness to support longer photoreceptors for improved light sensitivity, more ganglion cells for improved visual acuity, and more synaptic connections for improved visual processing would limit O2 flux due to the larger diffusion distance, necessitating compensatory mechanisms that ensure O2 delivery by either decreasing diffusion distance or increasing the O2 partial pressure (PO2) gradient; the driving force for O2 diffusion (Bellhorn, 1997; Buttery et al., 1991; Chase, 1982; Country, 2017; Damsgaard et al., 2019; Yu et al., 2009). Some vertebrates that evolved a thick retina, did so by lining the retina's inner (i.e. light facing) side with a high capillary density to halve the O2 diffusion distance and thus promote O2 delivery, while some mammals and a few teleosts have capillaries inside the retina (Damsgaard et al., 2019). In stark contrast, some teleost fishes evolved a unique solution to ensure sufficient O2 delivery to their thick retina despite a complete lack of internal capillaries by using an exceptional system for O2 supply, which delivers O2 at a PO2 far above that of the arterial blood (henceforth: O2 secretion). A similar O2 secretion mechanism was initially described in the teleost swim bladder, where blood acidification in the capillaries drives O2 from hemoglobin (Hb) into the swim bladder lumen in order to regulate buoyancy against high hydrostatic pressures at depth (Berenbrink et al., 2005; Steen, 1963a). Later, O2 secretion was also described in the teleost retina, where blood PO2 can increase from around 85 mmHg in the central arteries to beyond 1300 mmHg in the retina of some fish species (Randall and Cameron, 1973; Wittenberg and Wittenberg, 1962). Oxygenated blood is supplied to the retina from the pseudobranch that drains into a counter-current rete (Barnett, 1951; Copeland, 1980; Müller, 1841; Walls, 1942), the choroid rete mirabile, which allows the high PO2 to be magnified and localized behind the retina by permitting diffusion of O2 from the venous to the arterial side of the rete. The evolutionary innovation of the choroid rete provided a high O2 flux to the thick fish retina without obstructing the optical path. It likely enabled an increase in visual performance that may have facilitated niche expansions and novel feeding types and may have contributed to the explosive adaptive radiation of the teleosts, that today, represent half of all vertebrates (Berenbrink et al., 2005; Randall et al., 2014).

Figure 1 with 1 supplement see all
Retinal micro-anatomy and oxygen distribution in the retina of rainbow trout (Oncorhynchus mykiss) (A) and white sturgeon (Acipenser transmontanus) (B).

Histology indicates a thick retina and presence of a choroid rete mirabile in the rainbow trout and a thin retina and absence of a choroid rete mirabile in the white sturgeon. PEPRL constitutes the outer retina, and ONL to NFL constitute the inner retina. Partial pressure of O2 (PO2) distribution in the retina of rainbow trout (red) and white sturgeon (blue) (C) showing that rainbow trout has a higher PO2 (linear mixed-effects model, n = 6 [3 for each species], β ± SE = 390±75.8 mmHg, t = 5.14, p<0.001) and a steeper PO2 gradient (linear mixed-effects model, n = 6 [3 for each species], β ± SE = −1.06 ± 0.0859 mmHg µm−1, t = −12.4, p<0.001) when compared to white sturgeon. Abbreviations: CC, choriocapillaris; CRM, choroid rete mirabile; GCL, ganglion cell layer; INL, inner nuclear layer; IPL, inner plexiform layer; L, lens; NFL, nerve fiber layer; ONL, outer nuclear layer; OPL, outer plexiform layer; PEPRL, pigment epithelium and photoreceptor layer; S, sclera.

The hallmark of retinal O2 secretion is the Root effect of teleost Hbs, where H+-binding to Hb reduces not only its O2 affinity but also its O2 carrying capacity (Pelster and Weber, 1991; Root, 1931; Waser and Heisler, 2005; Weber and Fago, 2004). Thus, reductions in RBC pH lead to a significant right-shift of the O2 equilibrium curve and, consequently, a pronounced increase in blood PO2. However, the specific mechanisms responsible for acidifying the blood reaching the eye has remained largely elusive. While the pseudobranch slightly acidifies the blood before it reaches the eye, this acidification is not sufficient to activate the Root effect (Bridges et al., 1998; Kern et al., 2002; Waser and Heisler, 2005; Waser and Heisler, 2004), as otherwise, this would lead to a maladaptive loss of O2 to the surrounding water. Thus, an additional source of H+-secretion of the blood draining the pseudobranch is required to activate the Root effect and induce retinal O2 secretion. We propose that a key candidate for excreting H+s from the endothelial cells into the lumen is the vacuolar-type H+-ATPase (VHA). This multi-subunit enzyme uses the energy from ATP hydrolysis to transport H+ across biological membranes (Tresguerres, 2016). VHA is expressed in cells within the pseudobranch and the swimbladder gas-gland (Boesch et al., 2003; Kern et al., 2002). However, H+s do not rapidly cross the red blood cell membrane and must be combined with HCO3 to form CO2 (HCO3 dehydration) that readily diffuses across the RBC membrane (Brauner et al., 2019). This dehydration reaction is slow relative to rates of blood capillary transit, so we also propose that a catalytic plasma-accessible carbonic anhydrase (paCA) is required to take advantage of VHA H+-excretion for RBC acidification. Once CO2 is within the RBC, it must rapidly be converted into H+ by a RBC CA to activate the Root effect, as the vast majority of teleost Hbs are insensitive to direct CO2-binding and respond solely to changes in RBC pH (Damsgaard et al., 2014; Weber and Fago, 2004). Thus, the first aim of this study was to determine whether the choroid rete mirabile is a H+-secreting gland that can enhance retinal O2 secretion in teleosts, and more specifically, whether this process relies on the combined action of paCA and VHA in the rete blood vessels.

Retinal O2 secretion appears highly beneficial, as it magnifies the O2 diffusion gradient and permitted the evolution of a thicker retina (Damsgaard et al., 2019). However, nothing is known about how this superior mode of O2 delivery affected the function and evolution of the different retinal segments, which can shed insight into the co-evolutionary interactions between retinal O2 delivery and specific visual modalities. The photoreceptor layer (PEPRL in Figure 1AB) constituting the outer retina lie directly adjacent to the choroid and are readily supplied with O2 (Country, 2017; Walls, 1942) (see Figure 1AB for an overview of the retinal anatomy). In contrast, the components of the inner retina are positioned more distantly to the choroid (Country, 2017; Walls, 1942), and hence, changes in choroidal O2 delivery would be expected to have profound effects on inner retinal function. Because this region includes the synaptic layers for lateral inhibition, the ganglion cells for signal integration, and the nerve fiber layer for signal transduction (ONL to NFL in Figure 1AB), visual performance could be greatly impaired by limited O2 delivery. Thus, the secondary aim of this study was to assess the functional sensitivity of the inner and outer retina to changes in choroidal O2 supply, by inhibiting the different components of the hypothesized oxygen secretion pathway. Moreover, to further compare those findings with the morphological evolution of the inner and outer retina during evolutionary gains and losses of retinal O2 secretion based on existing literature data.

We designed this study to test three hypotheses: i) that the choroid rete mirabile acidifies the blood using VHA and paCA, which act together to permit O2 secretion and thus greatly augment O2 supply to the retina. ii) that the functional significance of O2 secretion is greatest to the inner retina, which is therefore more sensitive to changes in choroidal PO2 compared to the outer retina. iii) consequently, the evolutionary gains and losses of the choroid rete mirabile were associated with corresponding changes in the morphology of the inner, but not the outer, retina. To test these hypotheses, we first used immunohistochemical staining of choroid rete mirabile of rainbow trout to identify the presence and localization of VHA and paCA. Next, we measured retinal function and choroidal PO2 simultaneously in an in vivo rainbow trout model during sequential inhibition of extra- and intracellular CAs, revealing both the mechanisms for retinal O2 secretion in the choroid rete mirabile and the effects of choroidal PO2 on retinal function. Finally, we compared these functional findings to literature data on retinal morphology from multiple species to investigate whether the most PO2-sensitive parts of the retina display the most extensive morphological changes during evolutionary gains and losses of the choroid rete mirabile.

Results

Retinal oxygen distribution in species with and without a choroid rete mirabile

First, we confirmed the previous descriptions of a choroid rete mirabile and high PO2 in the eye of rainbow trout (Oncorhynchus mykiss, Walbaum, 1792) and to compare the retinal PO2 values to those of white sturgeon (Acipenser transmontanus, Richardson, 1836) that is not expected to possess a choroid rete mirabile based on the absence of this structure in other members of the genus (Berenbrink et al., 2005; Damsgaard et al., 2019). Histological sectioning of both species' eyes confirmed the presence of a choroid rete mirabile in rainbow trout and its absence in white sturgeon (Figure 1AB). Micro-CT of a rainbow trout head filled with a radiopaque contrast agent further revealed the three-dimensional anatomy of vascular structures involved in O2 secretion (Figure 1—figure supplement 1; Supplementary file 1). Maximal transverse thickness of the retina was 135 and 425 µm in sturgeon and trout, respectively. We measured transretinal PO2 profiles in three individuals of the two species using an ultrathin PO2-sensitive electrode. As predicted, we found a much higher PO2 in the retina of rainbow trout compared to that of white sturgeon (linear mixed-effect model, n = 6 [3 for each species], β ± SE = 390±75.8 mmHg, t = 5.14, p<0.001) with a PO2 of 732 ± 58.6 and 71.22 ± 4.94 mmHg in the choroid of rainbow trout and white sturgeon, respectively. Further, these data showed a 6.2-fold steeper slope of the PO2 profile in the trout retina compared to the sturgeon retina (linear mixed-effect model, n = 6 [3 for each species], β ± SE = −1.06 ± 0.0859 mmHg µm−1, t = −12.4, p<0.001).

Immunolocalization of vacuolar-type proton ATPase and carbonic anhydrase four in the choroid rete mirabile

To illuminate the pathways for retinal oxygen secretion, we tested for the presence, localization, and activities of VHA and paCA within the choroid rete mirabile of rainbow trout. Western blotting showed the presence of VHA and CA4 proteins in tissue homogenates of the choroid rete mirabile (Figure 2—figure supplement 1). To localize these proteins within the choroid rete mirabile, we used immunohistochemistry and confocal super-resolution microscopy on tissue sections, showing that CA4 and VHA were both present in endothelial cells of the choroid rete mirabile vasculature (Figures 2 and 3). To determine the subcellular location of these enzymes, we used the nucleus of the endothelial cell as an intracellular reference. Super-resolution images showed that both CA4 and VHA were present on the luminal side of the cell nucleus, likely in association with the plasma membrane of these endothelial cells (Figures 2D and 3D). This finding is consistent with a plasma-accessible orientation of VHA and CA4, and these enzymes seem to line the entire vasculature of the choroid rete mirabile in rainbow trout. Lastly, we showed a robust enzymatic activity of VHA in choroid rete mirabile homogenates of 2.20 ± 0.252 µmol ADP h−1 mg protein−1. Together, these results confirm the presence, cellular orientation, and functional activity of VHA and CA4 in the choroid rete mirabile of rainbow trout.

Figure 2 with 1 supplement see all
Blood vessels in the choroid rete mirabile of the rainbow trout eye, stained for the membrane-bound, carbonic anhydrase isoform 4 (CA4; green) and nuclei (blue).

(A) Overview of a choroid rete mirabile section with inserts denoting the magnified vessels shown in panels B and C. (B) Magnified blood vessel shows CA4 staining along the entire length of the vessel. The staining pattern of a single endothelial cell is consistent with an apical localization of CA4 protein (arrow), whereas the nuclei of endothelial cells (see asterisk) are located basolaterally of the CA4 staining. (C) Another magnified blood vessel shows CA4 staining (arrow) surrounding the entire vessel lumen with the cell nuclei (asterisk) found on the outside. To further illustrate the luminal orientation of CA4, panel (D) represents a cross-section of the vessel shown in C, clearly showing that CA4 staining is not found within the vessel itself, but only surrounding the lumen. Detection of CA4 was with a polyclonal antibody raised against rainbow trout CA4 that has been described previously (Georgalis et al., 2006; Gilmour et al., 2007), and nuclei were visualized with DAPI.

Blood vessels in the choroid rete mirabile of the rainbow trout eye, stained for the vacuolar-type proton ATPase (VHA; green) and nuclei (blue).

(A) Overview of a choroid rete mirabile section with an insert denoting the magnified vessel section in (B) that shows a single blood vessel with VHA staining. (C) Another blood vessel shows the staining pattern for VHA along the entire length of the vessel walls. In a single endothelial cell, the staining pattern for VHA indicates an apical localization of the protein, whereas the nuclei of endothelial cells (asterisk) are located basolaterally of the VHA staining. To further illustrate the luminal orientation of VHA, panel (D) represents a cross-section of the vessel shown in C, further illustrating that VHA staining is not found within the vessel itself, but only surrounding the blood lumen. Detection of VHA was with a polyclonal antibody raised against the conserved β-subunit of VHA, and nuclei were visualized with DAPI.

Pharmacological inhibition of oxygen secretion

Having identified the presence of VHA and CA4 in the luminal side of the choroid rete mirabile, we tested their functional role in facilitating retinal O2 secretion in vivo. Therefore, we instrumented anesthetized rainbow trout with electrodes in the retina for measuring an electroretinogram and an ultra-thin PO2-electrode in the choroid of the counter lateral eye to measure choroidal PO2. A dorsal aortic catheter was used to deliver arterial injections of saline (control), C18 (a functionally membrane-impermeable CA inhibitor within the duration of the experiment), and acetazolamide (a much more membrane-permeable CA inhibitor that affects both extracellular and intracellular CA) (see Figure 4—figure supplement 1 for experimental setup and timeline) (Rummer et al., 2013; Scozzafava et al., 2000; Supuran, 2008). Under control conditions, choroidal PO2 was 517 ± 95.3 mmHg (mean ± standard error of mean, n = 6), which is significantly higher than the typical PO2 values of 85 mmHg in the dorsal aortic blood of rainbow trout (Randall and Cameron, 1973). The control injection of saline did not affect choroidal PO2 (linear mixed-effect model followed by Tukey posthoc analysis, n = 6, β ± SE = −32.2 ± 84.7 mmHg, z = −0.380, Holm-adjusted p=0.70, Figure 4). The subsequent injection of C18 decreased choroidal PO2, to 226 ± 99.5 mmHg (n = 6, β ± SE = −259 ± 84.7 mmHg, z = −3.05, Holm-adjusted p=0.0068, Figure 4), verifying a role of paCA in facilitating Hb-O2 unloading to the retina. The addition of acetazolamide further decreased choroidal PO2, to 18.3 ± 13.2 mmHg (n = 6, β ± SE = −207 ± 84.7 mmHg, z = −2.45, Holm-adjusted p=0.0283, Figure 4), indicating an additional involvement of intracellular CAs in acidifying the red blood cell to enhance O2 secretion to the retina. These results in combination with the immunohistochemical and biochemical data strongly support the hypothesis that VHA and paCA act together to facilitate O2 secretion in the teleost retina.

Figure 4 with 1 supplement see all
Effects of carbonic anhydrase inhibition on retinal oxygen secretion.

Choroidal PO2 was measured in anesthetized rainbow trout using an ultra-thin PO2 electrode inserted into the choroid during sequential injections of saline, C18, or acetazolamide (Az) via a dorsal aorta catheter. The saline injection did not affect choroidal PO2, but the injection of C18 and Az led to sequential reductions in choroidal PO2, as indicated by letters that differ (linear mixed-effect model, p<0.001). Black circles connected by solid lines represent mean choroidal PO2 at 15 time points, and dashed lines represent standard error of mean (n = 6).

The role of oxygen secretion for retinal function

During the progressive inhibition of retinal O2 secretion measured in the right eye, we quantified the functional implications for vision in the left eye by recording electroretinograms in response to pulses of 525 nm light (Figure 4—figure supplement 1). Each light stimulus event consisted of six 0.1 ms light pulses separated by 1 s intervals, with stimulations repeated every fifth minute. Under control conditions, rainbow trout exhibited the normal features of a vertebrate electroretinogram with distinct a- and b-waves (Figure 5A), representing the hyperpolarization of the photoreceptors and the depolarization of the ON-center bipolar cells within the inner retina, respectively. The amplitudes of the a- and b-waves of the electroretinogram (Va and Vb, respectively) displayed absolute reductions with reduced choroidal PO2 (linear mixed-effect model using log10-transformed PO2, n = 4, β ± SE = 0.383±0.0565, t = 6.79, p<0.001), but with a 2.1-fold greater effect on the b-wave compared to the a-wave (p<0.001). This finding supports the second hypothesis that the inner retina is more sensitive to changes in choroidal PO2 compared to the outer retina.

Effects of PO2 on retinal function.

(A) Representative sets of six electroretinograms (colored traces) at high and low PO2 (right and left panels, respectively) measured after six 0.1 ms pulses of green light (black vertical arrow) and then averaged (black trace). The averaged electroretinograms were analyzed for the amplitude, V, and implicit time, IT, of the a- and b-wave (green and blue, respectively). Amplitudes (B) and implicit times (C) of the a- and b-wave in the electroretinogram of trout during progressive inhibition of retinal O2 secretion by C18 and acetazolamide (n = 4). The properties of the electroretinograms in A are marked by red symbols. Solid lines are linear mixed-effect model fits to the data (all p<0.001, see text for statistics).

Further, the data provided information about the temporal responsiveness of the inner and outer retina measured as the implicit time (IT) of the a- and b-waves, ITa and ITb, respectively, quantified as the time from the light stimulus to the peak of the respective waves (Figure 5A). The data showed that ITa was impaired by reductions in choroidal PO2 (linear mixed-effect model using log10-transformed PO2 in mmHg, n = 4, β ± SE = −53.2 ± 7.93, t = −6.70, p<0.001). ITb was similarly affected by reductions in choroidal PO2 (linear mixed-effect model using log10-transformed PO2, n = 4, β ± SE = −52.8 ± 11.8, t = −4.47, p<0.001).

The role of the oxygen secretion mechanism on the evolutionary dynamics of the inner and outer retina morphology

Using published data (Damsgaard et al., 2019), we compared the morphology of the inner and outer retina in species with and without a choroid rete mirabile (Figure 6). This analysis showed significantly thicker inner retina in species with a choroid rete mirabile (204 ± 92.6 µm [mean ± s.d.], n = 19) compared to species without (97.1 ± 37.0 µm [mean ± s.d.], n = 12) (phylogenetic analysis of variance simulation, p<0.001, n = 31). In contrast, the analysis did not show any differences in the thickness of the outer retina between species with and without a choroid rete mirabile (phylogenetic analysis of variance simulation, p=0.51, n = 31). Specifically, we identified significant differences in retinal layer thickness between species with and without a choroid rete mirabile in the four layers positioned most distant to the choroid (i.e. the inner nuclear layer (p=0.0499, n = 31), the inner plexiform layer (p=0.00754, n = 31), the ganglion cell layer (p=0.104, n = 31), and the nerve fiber layer (p=0.00726, n = 31); Figure 6—figure supplement 1). These findings support the third hypothesis that the evolutionary gains and losses of the choroid rete mirabile during teleost radiation had large effects on the morphology of the inner retina, but not the outer retina.

Figure 6 with 1 supplement see all
Effects of the presence of a choroid rete mirabile on the morphology of the inner - and outer retina.

The transverse thickness of the inner- (A) and outer retina (B) in species with (red) and without (black) a choroid rete mirabile. Each dot represents species mean values obtained from the literature (Damsgaard et al., 2019). Effect sizes are visualized in the upper panels, showing the observed F-statistics (black vertical line) compared to a grey null-distributions of F-statistics from a phylogenetic analysis of variance simulation. This analysis showed a strong positive effect of the presence of a choroid rete mirabile on the inner retinal thickness (p<0.001, n = 31), but not on outer retinal thickness (p=0.51, n = 31).

Discussion

Our data reveal a mechanism by which active acidification of the blood in the eyes of teleosts greatly enhances O2 secretion to their largely avascular retinas. Here, VHA is predicted to pump H+s into the lumen of the choroid rete mirabile, where paCA catalyzes the dehydration of H+ and HCO3- into CO2 for RBC acidification. In addition, by studying the mechanism using various different techniques, we were able to independently verify this pathway using biochemical assays, immunohistochemistry and western blotting. Furthermore, inhibiting a key component of the mechanisms in vivo, the activity of paCA, enabled us to link active O2 secretion to the functional performance of the retina, where in particular, inner retinal function was impaired in the absence of active O2 secretion. This finding corroborates with phylogenetic evidence of a pronounced expansion of the inner retina upon the evolution of the O2 secretion mechanism. This novel pathway solves the mystery of the primary route for RBC acidification to secrete O2 into the retina, serving as a key exaptation for the adaptive increases in visual performance in early teleost evolution.

The role of the choroid rete mirabile in localized blood acidification

The Root effect and the ability of teleost blood to desaturate during a localized acidosis to increase retinal PO2 have been known for almost a century (Root, 1931; Steen, 1963b), and this desaturation is a critical component of the O2 secretory mechanism (Waser and Heisler, 2005; Wittenberg and Wittenberg, 1962). However, the role of the choroid rete mirabile and the specific mechanisms in blood acidification was poorly understood and was primarily shaped by observations by Fairbanks et al., 1974. They showed that CA was present in choroid rete mirabile homogenates and hypothesized that if this CA was expressed in the venous side of the rete, and if it was also plasma-accessible, then this paCA would catalyze the hydration of CO2 into H+ and HCO3 in the venous part of the rete, thereby facilitating the venous to arterial transport of HCO3 within the rete. However, this paCA-catalyzed CO2 hydration in isolation appears maladaptive as it would i) buffer the H+s secreted into the blood in the pseudobranch, increasing the demands for anaerobic CO2/H+-production by the retina to fuel O2 secretion, ii) prevent counter-current multiplication of CO2 in the rete, and iii) lead to a pronounced efflux of H+s from the rete into the systemic circulation. In contrast to this previous framework for choroid rete mirabile function, our data strongly support an active H+-secretory role of the choroid rete mirabile by identifying a VHA lining the endothelium (Figure 7). A co-localized paCA in the choroid rete mirabile dehydrates H+ and HCO3- into CO2 that can diffuse into the RBCs (Figure 7). The presence of plasma-accessible CA4 is critical for this last step, as fish plasma has no carbonic anhydrase activity (Henry et al., 1997). By catalyzing the otherwise slow dehydration reaction, the catalysis couples H+ secretion to the rapid production of CO2 that, ultimately, drives the unloading of O2 from Hb (Figure 7). This pathway is very significant for O2 secretion, as inhibition of paCA with C18 resulted in a 60% reduction in choroidal PO2. Thus, our data suggest that blood supplied from the pseudobranch is actively acidified within the choroid rete mirabile to activate the Root effect before the blood reaches the retina. This pathway does not contradict pseudobranchial H+-secretion, as proposed earlier, but instead indicates that the two tissues may act in concert to actively augment O2 unloading from Hb within the rete.

A proposed pathway for oxygen secretion in the choroid rete mirabile of teleost fishes.

Endothelial H+-secretion by vacuolar-type H+-ATPase (VHA, green) drives CO2 production facilitated by a plasma-accessible carbonic anhydrase (CA4, blue). This CO2 diffuses across the red blood cell membrane and is then dehydrated by carbonic anhydrase 2 (CA2, blue), producing H+s which bind to hemoglobin (Hb) and release O2. C18 is a membrane-impermeable CA inhibitor that inhibits only the paCA (Rummer et al., 2013). Acetazolamide (Az) is a membrane-permeable CA inhibitor that rapidly inhibits both CA2 and CA4.

While the current data strongly support the functional significance of a VHA – CA4 pathway for RBC acidification in the choroid rete mirabile, measurements of pH and PCO2 in the afferent and efferent vessels of the choroid rete mirabile are necessary to provide conclusive evidence of a proton secretory function of the choroid rete. Unfortunately, pharmacological VHA inhibition in live animals is not possible due to the involvement of VHA in multiple processes, including neurotransmitter reuptake at synapses. Thus, further detailed studies on the role of VHA in acid excretion conducted ex vivo in isolated rete preparations are required.

Furthermore, our in vivo data suggest that the VHA – paCA pathway may not be the only mechanism for blood acidification to drive retinal O2 secretion, as choroidal PO2 remained above typical arterial values after paCA inhibition by C18. These results are indicative of pathways for anaerobic CO2 production contributing to retinal O2 secretion, where the produced CO2 diffuses via the plasma and directly into the RBC without the need for paCA. Such pathways may include the pentose phosphate shunt, which has been suggested earlier to be involved in blood acidification in the retina (Bridges et al., 1998; Pelster and Weber, 1991).

The effect of oxygen secretion on retinal function

Our data showed a strong relationship between choroidal PO2 and retinal function with reduced amplitudes and increased implicit times of the a- and b-waves in the electroretinogram upon reductions in choroidal PO2. Earlier studies showed pronounced changes in the features of the electroretinogram upon acetazolamide administration (Fonner et al., 1973). These changes were linked to retinal hypoxemia, as acetazolamide administration had been observed to reduce retinal PO2 in separate studies (Fairbanks et al., 1969; Fairbanks et al., 1974). Our setup allowed for the simultaneous measurements of choroidal PO2 and the electroretinogram during progressive reductions in choroidal PO2 to add insight into the quantitative relationship between retinal hypoxemia and function.

Our data showed that the a-wave amplitude appears relatively unaffected by progressive retinal hypoxemia at high choroidal PO2, but rapidly decreases with reductions in choroidal PO2 below ~100 mmHg. These data indicate that photoreceptor function was only affected by retinal hypoxemia when choroidal PO2 fell below normal arterial levels. In contrast, the b-wave amplitude showed higher sensitivity to a reduction in choroidal PO2, suggesting a more pronounced dependence of the inner retinal layers to the mechanism of O2 secretion by the choroid rete. These results show a tremendous sensitivity of the retina to reductions in choroidal PO2 where retinal hypoxemia likely impairs the rate of oxidative phosphorylation in the mitochondria followed by the inability to maintain the transmembrane ionic gradients required for phototransduction (Bickler and Buck, 2007; Boutilier and St-Pierre, 2000). These differences in sensitivity of the inner and outer retina to reductions in choroidal PO2 possibly stems from their different positions relative to the O2 supply from the choroid rete: The photoreceptors comprising the outer retina lie directly adjacent to the choroid and experience the highest part of the O2 diffusion gradient and are therefore less sensitive to reductions in choroidal PO2. However, the synaptic layers comprising the inner retina are positioned further from the choroid and are, therefore, much more affected by reductions in choroidal PO2. These results suggest that any phenotypic changes in the capacity to deliver O2 at a high PO2 in the retina have the most pronounced effects on the function of the inner retina. Such phenotypic changes may include ontogenetic changes in the expression of Hb isoforms with altered Root effect (Bianchini, 2012), an ATP-mediated reduction in the Root effect during hypoxia acclimation (Weber and Lykkeboe, 1978; Wood and Johansen, 1972), and an arterial desaturation during hypoxia or exercise making a smaller O2 concentration available for O2 secretion. Assessing the interactions between vision and environmental stressors that affect blood O2 transport may provide novel insight into the respiratory mechanisms that affect fishes' visual performance.

The choroid rete mirabile and the evolution of retinal functional morphology

Our in vivo identification of a higher PO2 sensitivity of the inner- versus the outer retina suggests that any evolutionary change that increases choroidal PO2 may act to offset an O2 diffusion limitation on inner retinal O2 supply and, thus, be a pre-requisite for the evolutionary expansion of the inner retina. Our interspecific comparison of retinal morphology in species with and without a choroid rete mirabile strongly supports this idea. Taken together, our in vivo and phylogenetic data independently suggests that the O2 diffusion limitation to retinal thickness proposed in several studies (Buttery et al., 1991; Chase, 1982; Country, 2017; Damsgaard et al., 2019; Yu and Cringle, 2001) is mainly attributed to an O2 constraint on the inner retinal morphology. A thicker inner retina can house more synaptic connections for intra-retinal detection of motion, changes in brightness, and contrast generation in the inner plexiform layer before visual information is relayed via the ganglion cells to the brain (Rodieck, 1998). Thus, our findings imply that the origin of retinal O2 secretion around 270 million years ago in a common teleost ancestor was associated with improved visual processing, which may have facilitated novel feeding strategies involving visual prey identification and tracking. Further, multiple groups have secondarily lost the O2 secretory mechanism (Berenbrink et al., 2005; Damsgaard et al., 2019), which correspondingly suggest, that these groups have reduced capacities for visual processing.

Our retinal PO2-values in white sturgeon and rainbow trout are consistent with expected values in the retina of species with and without a choroid rete mirabile, respectively (Wittenberg and Wittenberg, 1962). The evolutionary origin of O2 secretion has mainly been discussed in the context of permitting the evolution of increased retinal thickness (Berenbrink et al., 2005; Damsgaard et al., 2019). However, the 10-fold higher choroidal PO2 associated with the presence of a choroid rete mirabile was not associated with a proportional difference in retinal thickness between trout and sturgeon. Instead, the slope of the PO2 profile was 6.2-fold higher in trout compared to sturgeon, which equals a proportionally higher O2 consumption rate in the trout retina than the sturgeon retina (assuming equal diffusive capacity for O2 in the retinae of the two species). Despite depending on two species only, this data set strongly suggests that the origin of O2 secretion permitted not only the evolution of a thicker retina, but also the evolution of much higher metabolic rates of the retina. Increased retinal thickness is typically associated with a higher area density of photoreceptors (Jeffery and Williams, 1994; Potier et al., 2017; Querubin et al., 2009), which may explain the higher O2 consumption rate, and which may provide an additional advantage to vision in terms on increased spatial resolution (Damsgaard et al., 2019).

Summary

The choroid rete mirabile in the eye of teleost fishes allows for the generation of exceptionally high PO2s in the retina and permitted the functional evolution of some of the most extreme retinal phenotypes among vertebrates with substantial expansions in the retinal layers associated with visual processing. Our identification of the VHA-paCA pathway for blood acidification to facilitate retinal O2 secretion represents a novel physiological function of the choroid rete mirabile in addition to counter-current gas-exchange, which together permit greatly enhanced O2 delivery to the retina. Our data further suggest that the origin of O2 secretion not only permitted the evolution of a thicker retina, but also added fuel to the metabolic fire to visual perception. These significant advantages to vision possibly allowed teleost fishes to explore new food resources and colonize novel environments, which may have contributed to the extraordinary adaptive radiation of the teleost fishes, which today represent half of all vertebrates (Berenbrink et al., 2005; Randall et al., 2014).

Materials and methods

Animal housing

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Rainbow trout (Oncorhynchus mykiss, Walbaum, 1792) and white sturgeon (Acipenser transmontanus, Richardson, 1836) were purchased as juveniles from Miracle Springs Inc (Mission, BC) and gifted from Vancouver Island University (Nanaimo, BC), respectively. The fish were housed in circular flow-through tanks with dechlorinated Vancouver tap water at 7°C until experimentation in the Department of Zoology at the University of British Columbia (UBC). The fish were fed to satiation with commercial dry pellets three times weekly. All procedures were conducted according to the Canadian Council on Animal Care and approved by the UBC Animal Care Committee (Protocol no. A15-0266).

Retinal PO2 profiling

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This experimental series was performed to assess baseline values for retinal PO2 in rainbow trout, for comparison with those in white sturgeon which was not expected to possess retinal O2 secretion based on the lack of a choroid rete mirabile in this genus (Berenbrink et al., 2005; Damsgaard et al., 2019). Individual animals were netted out of their holding tank, immersed into oxygenated dechlorinated tap water containing 50 mg l−1 pH-neutralized MS-222 (3-aminobenzoic acid ethylester buffered with HCO3). When branchial ventilation stopped, the animal was transferred to a surgical table with the left side up. The gills were constantly irrigated with oxygenated dechlorinated tap water containing 40–50 mg l−1 pH-neutralized MS-222 to maintain a surgical plane throughout the following experimental procedure, which lasted approximately 30 min.

Three rainbow trout (113 ± 10 g) and three sturgeon (875 ± 120 g) were used to measure transretinal PO2-profiles. First, an 18G needle was used to make a small puncture in the cornea in the pupil's anterior midline inside the iris. This procedure allowed direct access to the vitreous humor and underlying retina unobstructed by the lens. Then, a thin PO2 electrode with a 25 µm tip diameter (Unisense A/S, Aarhus, Denmark) was inserted into the eye through the corneal puncture using a motor-controlled micromanipulator (Zeiss, Germany). The electrode penetrated the retina in steps of 25 µm for 5 s each, while PO2 was recorded with a temporal resolution of 100 ms on a computer using the manufacturer's software (Unisense Sensor Trace Suite). All PO2 measurements were water vapor corrected using daily barometric pressure and relative humidity. After retinal PO2 profiling, each animal was euthanized by adding additional MS-222 to 100 mg l−1 and sampled as described below.

Histology

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Eyes from rainbow trout and white sturgeon were excised and fixed in 4% buffered paraformaldehyde. Eyes were dehydrated in an ethanol series (70%, 96%, 99.9%), embedded in paraffin, and cut in 5 µm intervals sections along the ventral-to-dorsal axis. All sections were stained with hematoxylin and eosin and imaged using bright-field microscopy with 4×, 10×, 20×, and 60× objectives. Maximal transverse thickness of the retina was measured as described in Damsgaard et al., 2019.

Vascular casts and computed tomography scanning

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To identify the three-dimensional anatomy of the vascular structures involved in O2 secretion in the eye of rainbow trout, we generated a vascular cast of the eye by injecting a polymer-based radiopaque contrast agent (Microfil MV-122, Flow Tech Inc, USA), which was imaged by micro-CT.

One rainbow trout was anesthetized as described above and placed on a surgical table with the ventral side up. An incision was made to access the heart, and a polyethylene catheter (PE50) was inserted into the ventral aorta and secured with silk sutures. First, the animal was perfused with a 60 ml kg−1 0.9% NaCl solution containing 50 IU ml−1 Na-heparin at a rate of 0.2 ml min−1, using a syringe pump (Harvard Apparatus PHD 2000, USA). Then, the animal was perfused with 60 ml kg−1 Microfil solution (compound:diluent:curing agent mix ratio was 1:3:0.4) at a rate of 0.1 ml min−1, and the animal was placed on ice for 4 hr until the resin had hardened. Finally, the head was dissected and placed in 10 volumes of 4% buffered formaldehyde and stored at 4°C for imaging.

First, micro-CT was performed on the intact head region using an XtremeCT system (Scanco Medical AG, Brüttisellen, Switzerland) with 1500 projections/180° and an isotropic voxel size of 41 µm, an X-ray tube voltage of 59.4 kVp, an X-ray type current of 119 μA, and an integration time of 132 ms. Then, the right eye was carefully excised and scanned at a higher resolution using a Scanco Medical µCT 35 scanner in high-resolution mode (1000 projections/180°) with an isotropic voxel size of 10 µm, an X-ray tube voltage of 45 kVp, an X-ray tube current of 177 µA, and an integration time of 2400 ms.

Amira 5.6 (FEI, Visualization Sciences Group) software was used for anatomical model building.

Perfusion clearing and fixation of tissues

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Twelve rainbow trout were netted out of their holding tank individually and immersed into aerated dechlorinated tap water and euthanized with 100 mg l−1 pH-neutralized MS222. When opercular ventilation stopped, the fish was transferred to a custom-made Styrofoam fish holder and injected in the caudal vein with 1 ml 0.9% NaCl containing 100 IU ml−1 Na-heparin using a 23G hypodermic needle. Then, the bulbus was cannulated with a PE50 catheter, the tail cut off, and the animal was perfused with 0.9% NaCl containing 100 IU ml−1 heparin via the catheter to remove all RBCs.

In four of those fish, the saline injection was followed by injection of 20 ml 4% paraformaldehyde in 0.9% NaCl. Both eyes were resected, fixed for 6 hr in 4% paraformaldehyde in 0.9% NaCl at 4°C, transferred to 50% ethanol overnight, and stored in 70% ethanol. Fixed tissues were shipped to the Scripps Institution of Oceanography (San Diego, CA) for immunohistochemistry.

In the remaining eight fish, the choroid rete mirabile was resected, flash-frozen in liquid nitrogen, and stored at −80°C for western blotting and to measure the enzymatic activity of VHA.

Immunolocalization of vacuolar-type proton-ATPase and carbonic anhydrase four in the choroid rete mirabile

Immunohistochemistry

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Localization of CA4 in the rete was with a custom affinity purified rabbit polyclonal antibody raised against amino acids 57–74 (TRRTLPDERLTPFTFTGY; at 0.34 mg ml−1; Abgent; San Diego, USA) of rainbow trout CA4 (GenBank AAR99330) and the antibody has been used and described in detail in previous studies on dogfish and rainbow trout (Georgalis et al., 2006; Gilmour et al., 2007). Other sections were immunolabeled with a rabbit anti-VHA antibody raised against the conserved β-subunit of VHA (AREEVPGRRGFPGY; at 3 mg ml−1; GenScript, Piscataway USA), which has been used to localize VHA in teleost fish blood vessels and inner ear ionocytes (Kwan et al., 2020). For immunohistochemistry, fixed tissues were stepwise dehydrated in ethanol, cleared in SafeClear II (Fisher Scientific 23044192; Hampton, USA) and embedded in paraffin. Thick sections (20 µm) were cut on a KD-1508B microtome (KEDEE, Zhejiang, China) and mounted on Superfrost Plus (Fisher Scientific 12-550-15) microscope slides. After clearing the paraffin, the tissue sections were stepwise re-hydrated, and a hydrophobic barrier was drawn around each section (ImmEdge, Vector Labs NC9545623; Burlingame, USA). After a 5-min wash in phosphate buffered saline (PBS, Corning 46–013 CM; Conring, USA), about 100 µL of blocking buffer (PBS with 2% normal goat serum and 0.2% keyhole limpet hemocyanin) was pipetted onto each section and incubated in a humidified chamber for 1 hr at room temperature. Thereafter, the blocking buffer was decanted, and sections were incubated with the primary antibodies (CA4: 1:250; VHA: 1:500) in blocking buffer overnight at room temperature in a humidified chamber. On each slide, one of the tissue sections was used as a negative control that was incubated with blocking buffer without a primary antibody. Detection of the primary antibodies was with a goat anti-rabbit IgG conjugated to Alexa 488 (Invitrogen A32731, Carlsbad, USA). Sections were rinsed three times with PBS-T (PBS with 0.2% tween 20), then incubated with secondary antibody (1:500) and DAPI (1:1000) in a humidified chamber for 1 hr at room temperature. Sections were rinsed three times in PBS-T, and coverslips were mounted with Fluoro-Gel (EMS, Hatfield, USA) and sealed with nail polish. Sections were imaged with a Zeiss Observer Z1 inverted microscope with LSM 800 confocal and super-resolution Airyscan detector (Oberkochen, Germany) and using ZEN systems blue edition software (v2.6).

Western blotting

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The specificity of CA4 VHA antibodies was validated by Western blotting. Therefore, frozen choroid rete mirabile samples were first homogenized with a mortar and pestle under liquid nitrogen, and the powdered tissue was resuspended in homogenization buffer on ice (in mmol l−1: 250 sucrose, 1 EDTA, 30, Tris at pH 7.5) with protease inhibitors DTT (Dithiothreitol; 1 mol l−1), PMSF (phenylmethylsulfonyl fluoride; 200 mmol l−1) and BHH (benzamidine hydrochloride hydrate; 10 mmol l−1). After that, rete tissues were homogenized further in a glass homogenizer and then centrifuged at 500 × g for 10 min to obtain a crude homogenate from the supernatant. Protein concentrations were measured with a Quick-start Bradford's assay (Bio-Rad, Hercules, USA) according to the manufacturer's instructions, and bovine serum albumin was used for standards. Samples were diluted in 4 × Laemmli buffer (Bio-Rad 1610747) and heated at 70°C for 10 min. Aliquots of 5 µg of protein were loaded into each lane of a Mini-Protean TGX SDS-gel (Bio-Rad, 4568026) and separated at 60 V for 15 min followed by 200 V for 45 min. Proteins were then wet-transferred onto 0.2 µm Immun-Blot PVDF membranes (BioRad1620177) at 90 mA for 12 hr at 4°C. The transfer was assessed using total protein staining with 0.5% Ponceau-S in 1% acetic acid. Blots were rinsed with TBS-T and blocked with 10% skim milk powder in TBS-T on a shake table over night at 4°C. After that, the membrane was cut into sections that were probed with primary antibodies in blocking buffer (CA4 and VHA 1:2000) on a shaker table for 1 hr at room temperature. Additionally, peptide preabsorption (1:5; antibody:peptide) served as a negative control for VHA. Protein size was assessed against a Precision Plus Protein Dual Color ladder (BioRad 1610374). All membranes were rinsed three times with TBS-T for 5 min at room temperature and were then incubated with a 1:5000 dilution of a goat anti-rabbit secondary antibody conjugated to horseradish peroxidase (IgG-HRP, Bio-Rad 1706515), on a shaker table for 1 hr at room temperature. Finally, membranes were rinsed with TBS-T, and proteins were visualized using a Clarity Western ECL chemiluminescent HRP substrate (Bio-Rad 1705061). Images were acquired in the Bio-Rad Universal III Hood and Image Lab software (Bio-Rad, v6.0.1).

Enzymatic activity of vacuolar-type proton-ATPase in the choroid rete mirabile

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To determine the activity of VHA in the choroid rete mirabile, we used a method in which ATP hydrolysis was linked to the oxidation of NADH via lactate dehydrogenase and pyruvate kinase and the reaction was followed spectrophotometrically (McCormick, 1993). The choroid rete mirabile were homogenized on a Precellys 24 tissue homogenizer (Bertin Technologies SAS, Montigny-le-Bretonneux, France; 5,000 rpm, 20 s, 4°C) using 1.0 mm ceria stabilized zirconium oxide beads (Next Advance, Averill Park, NY) in SEID buffer (150 mmol l−1 sucrose, 10 mmol l−1 EDTA, 50 mmol l−1 imidazole, 0.1% sodium deoxycholate, pH 7.3). The homogenate was centrifuged (5,000 rpm, 1 min, 4°C), and the supernatant was used for the subsequent enzymatic assay. The ATPase activity was monitored in triplicate at 340 nm and 25°C in the absence or presence of 1 mmol l−1 ouabain or 1 mmol l−1 ouabain with 4 mmol l−1 N-ethylmaleimide. The maximum velocity of the hydrolysis reaction was determined as the maximal slope of absorbance over time. Sample protein concentration was measured using Bradford's reagent and bovine serum albumin as protein standards. The maximum reaction velocity (Vmax) was expressed as the rate of ADP hydrolysis per mg protein. The Na+/K+-ATPase activity was determined by subtracting control and ouabain Vmax, and VHA activity was determined by subtracting Vmax during ouabain and ouabain+NEM inhibition.

The role of carbonic anhydrase in retinal oxygen secretion in vivo

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This experimental series was designed to identify and quantify the role of paCA on O2 secretion (right eye) and retinal activity (left eye) by injecting intra- and extracellular CA inhibitors through a dorsal aorta catheter. The instrumentation consisted of three steps and lasted approximately 30 min in total per animal.

First, six rainbow trout (624 ± 259 g) were anesthetized as in Retinal PO2 profiling and instrumented with an indwelling catheter in the dorsal aorta (PE50) that was secured to the dorsal lining of the mouth with a silk suture (Soivio et al., 1975). The fish was positioned in an upright position while still irrigating the gills with oxygenated water containing the anesthetic. During this procedure, the animal's position was fixed by stereotaxis, and its body was covered in wet paper towels to prevent cutaneous desiccation.

Second, a 23G needle was used to make a small puncture in the cornea into the anterior midline of the pupil of the left eye, and an Ag/AgCl electrode (0.008’ diameter silver wire,~4 mm chlorided in sodium hypochlorite solution; Cat No. 786500, A-M Systems, WA) connected to the positive terminal of an amplified head stage was introduced into the vitreous humor of that eye using forceps (Fonner et al., 1973). A second identical Ag/AgCl reference electrode, connected to the negative terminal of the head stage, was inserted into the left nare, and two Ag/AgCl pellet electrodes (A-M systems) were used to ground the animal, one placed in the mouth and the other on the back. The potential between the two head stage electrodes was amplified using a differential amplifier (DP-311, Warner Instruments, Hamden, CT) set to 0.1 to 100 Hz (high-pass and low-pass, respectively) and gain set at 10 k. The amplifier’s output was digitized using a Powerlab 8/35 DAQ analog to digital converter (ADInstruments, Bella Vista, NSW, Australia) and recorded continuously at 400 Hz on a laptop running LabChart software (ADIstruments). The green die of a tri-color LED (ASMT-MT00-00001, Broadcom Ltd., CA; peak wavelength 525 nm) was placed behind a semi-opaque white acrylic diffuser (2.7 mm thick, ST-S-401, Sumipex, Singapore) that was then positioned 5 cm away from the left eye to allow for light stimulations of the eye every fifth min to quantify retinal function (Figure 4—figure supplement 1). Six 0.1 ms-long pulses of green light spaced by 1 s were emitted from the LED by using the 0–10 V output of the PowerLab to drive a dimmable, buck-boost LED driver (A011-D-V-350 FlexBlock, LEDdynamics, Inc, VT). Electroretinogram data was not recorded in two of the six individuals due to electrode displacement during the insertion of the PO2-sensitive electrode.

Third, an 18G needle was used to make a small puncture in the cornea at either the anterior or caudal midline of the pupil of the right eye. A PO2 electrode with a 25-µm-thick tip was introduced into the eye as described in Retinal PO2 profiling and was positioned in the choroid, as identified as the tip position where PO2 was maximal. Then, the room was darkened to allow the fish to dark adapt for 15 min, and all subsequent procedures were performed in complete darkness.

The experimental series was initiated by six light stimuli separated by 1 s at time zero and every 5 min throughout the 55 min protocol (Figure 4—figure supplement 1). At time 1 min, a bolus of 250 µl kg−1 0.9% NaCl solution with 50 IU ml−1 heparin (saline) was injected into the dorsal aorta catheter. The effect of saline on the electroretinogram and choroidal PO2 was assessed by comparing time points 0 and 5 min. At time 6 min, a bolus of 250 µl kg−1 body mass of saline with DMSO (80:20) and 10 mmol l−1 C18, a CA inhibitor with slow membrane permeability (Scozzafava et al., 2000; Supuran, 2008), was injected into the dorsal aorta catheter followed by a 250 µl saline bolus to clear the catheter (final blood C18 concentration of 0.2 mmol l−1). A previous study has shown that this concentration of C18 will not significantly inhibit CA within rainbow trout RBCs over a 30 min time-frame (Rummer et al., 2013); therefore, for the duration of our protocol C18 was functionally membrane-impermeable. The effect of C18 on the electroretinogram and choroidal PO2 was assessed every five mins over the next 25 min. At time 31 min, a bolus of 250 µl kg−1 of a 27 mmol l−1 acetazolamide, a highly membrane-permeable CA inhibitor (prepared in 50:50 saline and DMSO), was injected into the dorsal aorta catheter to achieve final blood acetazolamide concentration of 0.135 mmol l−1. The effect of acetazolamide on the electroretinogram and choroidal PO2 was assessed every five min over the next 25 min. All injections were followed by a 250 µl saline bolus to clear the catheter. The fish remained anesthetized throughout the following experimental procedure and was euthanized upon completion by immersion into water containing 100 mg l−1 pH-neutralized MS-222.

Calculations and statistical analyses

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In the retinal PO2 profiling, the effects of species and diffusion distance on retinal PO2 was assessed using a linear mixed-effect model with species (rainbow trout or white sturgeon) and distance from the choroid as fixed effects and using individual fish as a random effect using the lmer()-function in the lme4-package for R (Bates et al., 2015). A likelihood ratio test was used to assess the effects of each fixed effect by comparing model fits with and without the fixed effect of interest.

The effects of injection of saline, C18, and acetazolamide on choroidal PO2 were tested using a linear mixed-effect model using time as a fixed effect and individual fish as a random effect. To avoid problems with too many multiple comparisons, we compared choroidal PO2 at time points 0, 5, 30, and 55 min only (see Figure 4—figure supplement 1 for timeline). These four time points were included in the analysis to represent values for control (0 min), the effect of saline injection (5 min), the effect of C18 injection (30 mins), and the effect of acetazolamide injection (55 mins). Pairwise differences between time points were identified with a Tukey’s honest significant difference test with a Holm correction.

The electroretinograms were analyzed for each of the twelve stimulus time points (see Figure 4—figure supplement 1 for timeline). The electroretinogram was recorded for six stimuli, which were averaged to remove noise, and this averaged electroretinogram was analyzed for implicit time (IT) and amplitudes (V) of the a- and b-waves (see Figure 5A for graphical representation of the electroretinogram containing annotations for amplitudes and implicit times of the a- and b-waves). The a-wave amplitude (Va) was found as the maximal hyperpolarization relative to the pre-stimulus potential (Figure 5A). The b-wave amplitude (Vb) was found as the maximal depolarization relative to Va. IT of the two waves was determined as the time from the stimulus to reach Va and Vb. All measured electroretinograms had a distinct a-wave, but a distinct b-wave was lost at low PO2s, so for those stimuli, Vb was set to zero, and ITb was excluded from the subsequent analysis.

The effect of choroidal PO2 on the implicit time of the a- and b-waves was tested using a linear mixed-effect model using log10-transformed PO2 and wave (a- or b-wave) as fixed effects and individual fish as a random effect. The choice of using log10-transformed PO2 rather than absolute PO2 in the models was based on model selection using Akaike weight.

To test the effects of the presence of the choroid rete mirabile on the morphology of the inner and outer retina, we summarized 50,000 phylogenetic analysis of variance simulations (Garland et al., 1993) using phylANOVA()-function in the phytools-package in R (Revell, 2012) using published morphological data on the retina (Damsgaard et al., 2019) from 31 species, and a using a maximum clade credibility tree generated in Damsgaard et al., 2020 from 100 Bayesian posterior probability trees from Rabosky et al., 2018. The significance level was set to 0.05. All raw data and R scripts to analyze the data are available on https://figshare.com/articles/Source_data_1/12319763.

Data availability

All raw data and R scripts to analyze the data are available on Figshare (https://doi.org/10.6084/m9.figshare.12319763).

The following data sets were generated
The following previously published data sets were used

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Article and author information

Author details

  1. Christian Damsgaard

    Department of Zoology, University of British Columbia, Vancouver, Canada
    Present address
    Aarhus Institute of Advanced Studies & Section for Zoophysiology, Department of Biology, Aarhus University, Aarhus, Denmark
    Contribution
    Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Visualization, Methodology, Writing - original draft, Project administration, Writing - review and editing
    For correspondence
    cdamsg@zoology.ubc.ca
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-5722-4246
  2. Henrik Lauridsen

    Department of Clinical Medicine, Aarhus University, Aarhus, Denmark
    Contribution
    Conceptualization, Resources, Formal analysis, Funding acquisition, Investigation, Visualization, Methodology, Writing - review and editing
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-8833-4456
  3. Till S Harter

    Scripps Institution of Oceanography, UC San Diego, La Jolla, United States
    Contribution
    Conceptualization, Formal analysis, Investigation, Visualization, Methodology, Writing - review and editing
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-1712-1370
  4. Garfield T Kwan

    Scripps Institution of Oceanography, UC San Diego, La Jolla, United States
    Contribution
    Formal analysis, Funding acquisition, Investigation, Visualization, Methodology, Writing - review and editing
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-9183-2731
  5. Jesper S Thomsen

    Department of Biomedicine, Aarhus University, Aarhus, Denmark
    Contribution
    Resources, Funding acquisition, Investigation, Writing - review and editing
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-9386-6679
  6. Anette MD Funder

    Department of Forensic Medicine, Aarhus University, Aarhus, Denmark
    Contribution
    Investigation, Writing - review and editing
    Competing interests
    No competing interests declared
  7. Claudiu T Supuran

    Università degli Studi di Firenze, Neurofarba Department, Sezione di Scienze Farmaceutiche, Florence, Italy
    Contribution
    Resources, Writing - review and editing
    Competing interests
    No competing interests declared
  8. Martin Tresguerres

    Scripps Institution of Oceanography, UC San Diego, La Jolla, United States
    Contribution
    Conceptualization, Resources, Supervision, Funding acquisition, Methodology, Writing - review and editing
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-7090-9266
  9. Philip GD Matthews

    Department of Zoology, University of British Columbia, Vancouver, Canada
    Contribution
    Conceptualization, Resources, Supervision, Investigation, Methodology, Writing - review and editing
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-0682-8522
  10. Colin J Brauner

    Department of Zoology, University of British Columbia, Vancouver, Canada
    Contribution
    Conceptualization, Resources, Supervision, Funding acquisition, Methodology, Writing - review and editing
    Competing interests
    No competing interests declared

Funding

Carlsbergfondet (CF16-0713)

  • Christian Damsgaard

Carlsbergfondet (CF17-0195)

  • Christian Damsgaard

Carlsbergfondet (CF18-0658)

  • Christian Damsgaard

Carlsbergfondet (CF17-0778)

  • Henrik Lauridsen

National Science Foundation (IOS 1754994)

  • Martin Tresguerres

National Science Foundation (NSF Graduate Research Fellowship)

  • Garfield T Kwan

Velux Fonden

  • Henrik Lauridsen
  • Jesper S Thomsen

Natural Sciences and Engineering Research Council of Canada (2018-04172)

  • Colin J Brauner

The study design, data collection, and interpretation were not influenced by any funders.

Acknowledgements

We thank Jacelyn Shu and William K Milsom for technical assistance, Kathleen M Gilmour, Jonathan M Wilson, Steve F Perry, and Stephen D McCormick for contributing carbonic anhydrase antibodies, Dan Baker for the sturgeon, Kristian Beedholm for help with data analysis, and Jacelyn Shu for illustrating the rainbow trout in Figure 4—figure supplement 1.

Ethics

Animal experimentation: All procedures were conducted according to the Canadian Council on Animal Care and approved by the UBC Animal Care Committee (Protocol no. A15-0266).

Copyright

© 2020, Damsgaard et al.

This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.

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  1. Christian Damsgaard
  2. Henrik Lauridsen
  3. Till S Harter
  4. Garfield T Kwan
  5. Jesper S Thomsen
  6. Anette MD Funder
  7. Claudiu T Supuran
  8. Martin Tresguerres
  9. Philip GD Matthews
  10. Colin J Brauner
(2020)
A novel acidification mechanism for greatly enhanced oxygen supply to the fish retina
eLife 9:e58995.
https://doi.org/10.7554/eLife.58995

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https://doi.org/10.7554/eLife.58995

Further reading

    1. Chromosomes and Gene Expression
    2. Evolutionary Biology
    Timothy Fuqua, Yiqiao Sun, Andreas Wagner
    Research Article

    Gene regulation is essential for life and controlled by regulatory DNA. Mutations can modify the activity of regulatory DNA, and also create new regulatory DNA, a process called regulatory emergence. Non-regulatory and regulatory DNA contain motifs to which transcription factors may bind. In prokaryotes, gene expression requires a stretch of DNA called a promoter, which contains two motifs called –10 and –35 boxes. However, these motifs may occur in both promoters and non-promoter DNA in multiple copies. They have been implicated in some studies to improve promoter activity, and in others to repress it. Here, we ask whether the presence of such motifs in different genetic sequences influences promoter evolution and emergence. To understand whether and how promoter motifs influence promoter emergence and evolution, we start from 50 ‘promoter islands’, DNA sequences enriched with –10 and –35 boxes. We mutagenize these starting ‘parent’ sequences, and measure gene expression driven by 240,000 of the resulting mutants. We find that the probability that mutations create an active promoter varies more than 200-fold, and is not correlated with the number of promoter motifs. For parent sequences without promoter activity, mutations created over 1500 new –10 and –35 boxes at unique positions in the library, but only ~0.3% of these resulted in de-novo promoter activity. Only ~13% of all –10 and –35 boxes contribute to de-novo promoter activity. For parent sequences with promoter activity, mutations created new –10 and –35 boxes in 11 specific positions that partially overlap with preexisting ones to modulate expression. We also find that –10 and –35 boxes do not repress promoter activity. Overall, our work demonstrates how promoter motifs influence promoter emergence and evolution. It has implications for predicting and understanding regulatory evolution, de novo genes, and phenotypic evolution.

    1. Evolutionary Biology
    Matthew Osmond, Graham Coop
    Research Article Updated

    Spatial patterns in genetic diversity are shaped by individuals dispersing from their parents and larger-scale population movements. It has long been appreciated that these patterns of movement shape the underlying genealogies along the genome leading to geographic patterns of isolation-by-distance in contemporary population genetic data. However, extracting the enormous amount of information contained in genealogies along recombining sequences has, until recently, not been computationally feasible. Here, we capitalize on important recent advances in genome-wide gene-genealogy reconstruction and develop methods to use thousands of trees to estimate per-generation dispersal rates and to locate the genetic ancestors of a sample back through time. We take a likelihood approach in continuous space using a simple approximate model (branching Brownian motion) as our prior distribution of spatial genealogies. After testing our method with simulations we apply it to Arabidopsis thaliana. We estimate a dispersal rate of roughly 60 km2/generation, slightly higher across latitude than across longitude, potentially reflecting a northward post-glacial expansion. Locating ancestors allows us to visualize major geographic movements, alternative geographic histories, and admixture. Our method highlights the huge amount of information about past dispersal events and population movements contained in genome-wide genealogies.