1,154 results found
    1. Chromosomes and Gene Expression

    Integrative analysis of DNA replication origins and ORC-/MCM-binding sites in human cells reveals a lack of overlap

    Mengxue Tian, Zhenjia Wang ... Chongzhi Zang
    The ~20,000 origins of replication in human cell lines that are reproducibly identified by multiple techniques in multiple cell lines are distant from known origin recognition complex and MCM2-7-binding sites.
    1. Chromosomes and Gene Expression

    Dynamic relocalization of replication origins by Fkh1 requires execution of DDK function and Cdc45 loading at origins

    Haiyang Zhang, Meghan V Petrie ... Oscar M Aparicio
    Establishment of replication-timing involves Fkh1-dependent recruitment and execution of DDK function in G1 phase resulting in dynamic relocalization of origins within the nucleus in anticipation of CDK-dependent origin activation.
    1. Chromosomes and Gene Expression
    2. Genetics and Genomics

    Identification of 1600 replication origins in S. cerevisiae

    Eric J Foss, Carmina Lichauco ... Antonio Bedalov
    Replication origins in yeast are more widespread than previously believed.
    1. Developmental Biology
    2. Chromosomes and Gene Expression

    Spatiotemporal coupling and decoupling of gene transcription with DNA replication origins during embryogenesis in C. elegans

    Ehsan Pourkarimi, James M Bellush, Iestyn Whitehouse
    Replication origins are fundamental organizers and regulators of gene activity through embryonic development.
    1. Biochemistry and Chemical Biology
    2. Chromosomes and Gene Expression

    Antagonistic control of DDK binding to licensed replication origins by Mcm2 and Rad53

    Syafiq Abd Wahab, Dirk Remus
    The mechanism of Dbf4-dependent kinase (DDK) recruitment to replication origins and its regulation by the checkpoint have been identified.
    1. Chromosomes and Gene Expression

    Prevalent and dynamic binding of the cell cycle checkpoint kinase Rad53 to gene promoters

    Yi-Jun Sheu, Risa Karakida Kawaguchi ... Bruce Stillman
    The localization of Rad53 cell cycle checkpoint kinase to many gene promoters and the dynamic changes in response to replication stress suggests that the kinase may coordinate genome stability and gene expression.
    1. Chromosomes and Gene Expression
    2. Computational and Systems Biology

    The eukaryotic bell-shaped temporal rate of DNA replication origin firing emanates from a balance between origin activation and passivation

    Jean-Michel Arbona, Arach Goldar ... Benjamin Audit
    The universal eukaryotic DNA replication kinetics is the consequence of simple physicochemical rules resulting from the localisation of potential replication origins at discrete sites and the diffusion of limiting origin firing factors in the nuclear space.
    1. Computational and Systems Biology
    2. Evolutionary Biology

    An evolutionary model identifies the main evolutionary biases for the evolution of genome-replication profiles

    Rossana Droghetti, Nicolas Agier ... Marco Cosentino Lagomarsino
    Mathematical modeling and data analysis show that, over evolutionary times, the yeast temporal program of replication strives to avoid stalling events and minimize interference between neighbor origins.
    1. Chromosomes and Gene Expression

    Human ORC/MCM density is low in active genes and correlates with replication time but does not delimit initiation zones

    Nina Kirstein, Alexander Buschle ... Aloys Schepers
    Replication origins are established throughout the genome with the exception of transcribed genes, and the local chromatin composition likely modulates the density of ORC and MCM as well as origin activation.
    1. Chromosomes and Gene Expression
    2. Microbiology and Infectious Disease

    Mapping replication dynamics in Trypanosoma brucei reveals a link with telomere transcription and antigenic variation

    Rebecca Devlin, Catarina A Marques ... Richard McCulloch
    Mapping DNA replication timing, allied to genetic analysis of a RecQ repair helicase, reveals that antigenic variation in the African trypanosome may be initiated by locus-specific, replication-derived sequence instability.

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