Browse our latest Chromosomes and Gene Expression articles

Page 23 of 118
    1. Chromosomes and Gene Expression

    Cancer: Examining the cooperation between extrachromosomal DNA circles

    Jiahui Zhang, Cheng-Zhong Zhang
    In a departure from previous findings, new results suggest that free-floating pieces of DNA which carry additional copies of cancer-driving genes do not tend to cluster or have increased transcription.
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    1. Chromosomes and Gene Expression

    Oncogene expression from extrachromosomal DNA is driven by copy number amplification and does not require spatial clustering in glioblastoma stem cells

    Karin Purshouse, Elias T Friman ... Wendy A Bickmore
    In glioblastoma stem cells, oncogenes on extrachromosomal DNA do not cluster at distances in keeping with coordinated transcription, with amplified gene expression driven by copy number rather increased transcriptional efficiency.
    1. Cell Biology
    2. Chromosomes and Gene Expression

    Overcoming the cytoplasmic retention of GDOWN1 modulates global transcription and facilitates stress adaptation

    Zhanwu Zhu, Jingjing Liu ... Bo Cheng
    Human GDOWN1 is identified as an extremely tightly controlled nucleocytoplasmic shuttling protein, and its translocation into the nucleus plays a crucial role in modulating the global transcription and facilitating the cellular adaptation to certain stresses.
    1. Chromosomes and Gene Expression
    2. Genetics and Genomics

    Nucleotide-level linkage of transcriptional elongation and polyadenylation

    Joseph V Geisberg, Zarmik Moqtaderi ... Kevin Struhl
    Cleavage/polyadenylation, the process generating mRNA 3' ends, is linked at the nucleotide level to the position of RNA polymerase II, indicating a spatial coupling so polyadenylation occurs rapidly upon emergence of the nascent RNA from the Pol II elongation complex.
    1. Chromosomes and Gene Expression
    2. Immunology and Inflammation

    SRSF6 balances mitochondrial-driven innate immune outcomes through alternative splicing of BAX

    Allison R Wagner, Chi G Weindel ... Kristin L Patrick
    The splicing factor SRSF6 helps regulate antiviral immunity and mitochondrial membrane integrity by balancing the abundance of two alternatively spliced isoforms of the apoptotic protein BAX.
    1. Chromosomes and Gene Expression
    2. Structural Biology and Molecular Biophysics

    Mechanisms governing target search and binding dynamics of hypoxia-inducible factors

    Yu Chen, Claudia Cattoglio ... Xavier Darzacq
    Live-cell single particle tracking reveals the intrinsically disordered regions of transcription factors playing an unanticipated role in the nuclear search and chromatin binding process leading to functional target site selectivity and gene activation.
    1. Chromosomes and Gene Expression

    Mcm2 promotes stem cell differentiation via its ability to bind H3-H4

    Xiaowei Xu, Xu Hua ... Zhiguo Zhang
    Mcm2 promotes mouse embryonic stem cells differentiation through manipulating chromatin landscapes at bivalent chromatin domains.
    1. Chromosomes and Gene Expression

    KAT2-mediated acetylation switches the mode of PALB2 chromatin association to safeguard genome integrity

    Marjorie Fournier, Amélie Rodrigue ... Fumiko Esashi
    The lysine acetyltransferases KAT2A and KAT2B regulate the dynamic chromatin association of the tumour suppressor protein PALB2, protecting active genes and promoting DNA damage repair in a context-dependent manner.
    1. Chromosomes and Gene Expression
    2. Genetics and Genomics

    Characterization of sequence determinants of enhancer function using natural genetic variation

    Marty G Yang, Emi Ling ... Thomas Vierbuchen
    Large-scale, allele-resolved mapping of cis-regulatory function in F1-hybrid mice reveals sequence determinants that control transcription factor binding and enhancer activity in native chromatin context.
    1. Chromosomes and Gene Expression
    2. Genetics and Genomics

    Condensin DC loads and spreads from recruitment sites to create loop-anchored TADs in C. elegans

    Jun Kim, David S Jimenez ... Sevinc Ercan
    Loading and linear translocation of condensin dosage compensation along the X-chromosomes create the loop-anchored topologically associating domains detected by Hi-C.