Computational and Systems Biology

Latest articles

1. 1. Microbiology and Infectious Disease
   2. Computational and Systems Biology

   Exploring the repository of de novo designed bifunctional antimicrobial peptides through deep learning

   Ruihan Dong, Rongrong Liu ... Cheng Zhu
2. 1. Neuroscience
   2. Computational and Systems Biology

   Modeled grid cells aligned by a flexible attractor

   Sabrina Benas, Ximena Fernandez, Emilio Kropff
3. 1. Computational and Systems Biology

   Analysis of science journalism reveals gender and regional disparities in coverage

   Natalie R Davidson, Casey S Greene

   Those quoted and mentioned in stories in Nature News mostly have names associated with men and are much less likely to have names associated with East Asia.
4. 1. Computational and Systems Biology

   A three filament mechanistic model of musculotendon force and impedance

   Matthew Millard, David W. Franklin, Walter Herzog
5. 1. Structural Biology and Molecular Biophysics
   2. Computational and Systems Biology

   Structural characterization and dynamics of AdhE ultrastructures from Clostridium thermocellum: A containment strategy for toxic intermediates?

   Samantha J. Ziegler, Brandon C. Knott ... Yannick J. Bomble
6. 1. Computational and Systems Biology
   2. Genetics and Genomics

   Spotless, a reproducible pipeline for benchmarking cell type deconvolution in spatial transcriptomics

   Chananchida Sang-aram, Robin Browaeys ... Yvan Saeys

   Estimating cell type composition from a gene expression mixture remains a challenging task, as evidenced by how a simple regression model outperforms many state-of-the-art spatial deconvolution methods.
7. 1. Computational and Systems Biology
   2. Cancer Biology

   Comparison of Tug-of-War Models Assuming Moran versus Branching Process Population Dynamics

   Khanh N. Dinh, Monika K. Kurpas, Marek Kimmel
8. 1. Cell Biology
   2. Computational and Systems Biology

   circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA

   Trine Line Hauge Okholm, Andreas Bjerregaard Kamstrup ... Christian Kroun Damgaard
9. 1. Microbiology and Infectious Disease
   2. Computational and Systems Biology

   Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data

   Michael B. Hall, Ryan R. Wick ... Lachlan J. M. Coin
10. 1. Computational and Systems Biology

    Systems analysis of miR-199a/b-5p and multiple miR-199a/b-5p targets during chondrogenesis

    K Patel, MJ Barter ... DP Shanley