Browse our latest Computational and Systems Biology articles

Page 60 of 128
    1. Cancer Biology
    2. Computational and Systems Biology

    Quantitative analysis of tumour spheroid structure

    Alexander P Browning, Jesse A Sharp ... Matthew Simpson
    A novel quantitative framework to analyse the inner structure of tumour spheroids in terms of the mechanisms that underly growth.
    1. Computational and Systems Biology
    2. Plant Biology

    A coupled mechano-biochemical model for cell polarity guided anisotropic root growth

    Marco Marconi, Marcal Gallemi ... Krzysztof Wabnik
    The spatial-temporal computer model of plant root meristem combines biomechanics and biochemical scales to reveal design principles underlying cell polarity and anisotropic growth during root development.
    1. Computational and Systems Biology
    2. Developmental Biology

    Supracellular organization confers directionality and mechanical potency to migrating pairs of cardiopharyngeal progenitor cells

    Yelena Y Bernadskaya, Haicen Yue ... Alex Mogilner
    The migrating pair of cardiac progenitors in the chordate Ciona robusta is the simplest possible supracellular cell collective whose organization helps them overcome resistance from surrounding embryonic tissues during cell migration.
    1. Computational and Systems Biology
    2. Neuroscience

    Rotational dynamics in motor cortex are consistent with a feedback controller

    Hari Teja Kalidindi, Kevin P Cross ... Stephen H Scott
    Integrating circuit-level theories about population dynamics in motor cortex with behavioral-level theories about motor control.
    1. Computational and Systems Biology
    2. Neuroscience

    Motor Control: Sensory feedback can give rise to neural rotations

    Omid G Sani, Maryam M Shanechi
    Investigating how an artificial network of neurons controls a simulated arm suggests that rotational patterns of activity in the motor cortex may rely on sensory feedback from the moving limb.
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    1. Computational and Systems Biology
    2. Genetics and Genomics

    Science Forum: Author-sourced capture of pathway knowledge in computable form using Biofactoid

    Jeffrey V Wong, Max Franz ... Chris Sander
    Biofactoid is a tool that enables researchers to capture information about molecular interactions in a form that is both human-readable and machine-computable, thereby allowing this information to be integrated into public knowledge-bases and to be widely disseminated.
    1. Cancer Biology
    2. Computational and Systems Biology

    Investigating the replicability of preclinical cancer biology

    Timothy M Errington, Maya Mathur ... Brian A Nosek
    A project to repeat experiments from high-impact papers in cancer biology found that the effects observed in replications were frequently weaker than, or inconsistent with, the effects reported in the original papers.
    1. Computational and Systems Biology
    2. Medicine

    Topological network analysis of patient similarity for precision management of acute blood pressure in spinal cord injury

    Abel Torres-Espín, Jenny Haefeli ... The TRACK-SCI Investigators
    The application of topological network analysis on multicenter high-frequency intra-operative physiology data discovers a precise range of blood pressure during surgery predicting poor recovery in spinal cord injury patients.
    1. Computational and Systems Biology
    2. Structural Biology and Molecular Biophysics

    Markov state models of proton- and pore-dependent activation in a pentameric ligand-gated ion channel

    Cathrine Bergh, Stephanie A Heusser ... Erik Lindahl
    Computational models of gating processes in an ion channel show how stability shifts upon ligand-binding and mutations are reproduced, which highlights mechanistic details and proposes a new role for symmetry in gating.
    1. Computational and Systems Biology
    2. Neuroscience

    Daily electrical activity in the master circadian clock of a diurnal mammal

    Beatriz Bano-Otalora, Matthew J Moye ... Mino DC Belle
    Circadian control of neuronal excitability in the master circadian clock of a diurnal mammal as revealed by whole-cell recording and mathematical modeling.