Browse our latest Computational and Systems Biology articles

Page 80 of 125
    1. Computational and Systems Biology
    2. Neuroscience

    Theoretical relation between axon initial segment geometry and excitability

    Sarah Goethals, Romain Brette
    Theoretical analysis uncovers the impact of axon initial segment plasticity on neural excitability.
    1. Computational and Systems Biology

    A molecular view on the escape of lipoplexed DNA from the endosome

    Bart MH Bruininks, Paulo CT Souza ... Siewert J Marrink
    The molecular insight in lipoplex transfection mechanisms helps in the development of efficient and affordable gene delivery systems.
    1. Computational and Systems Biology
    2. Structural Biology and Molecular Biophysics

    Approaching boiling point stability of an alcohol dehydrogenase through computationally-guided enzyme engineering

    Friso S Aalbers, Maximilian JLJ Fürst ... Marco W Fraaije
    By combining structure-based computational predictions and a thorough structural analysis, a highly thermostable enzyme, alcohol dehydrogenase, has been engineered.
    1. Cell Biology
    2. Computational and Systems Biology

    Deciphering anomalous heterogeneous intracellular transport with neural networks

    Daniel Han, Nickolay Korabel ... Thomas A Waigh
    Direct estimation of the Hurst exponent shows that endosomes and lysosomes reside in regimes of persistent and anti-persistent motion with heavy-tailed residence time distributions and motion correlated with endocytic function.
    1. Computational and Systems Biology
    2. Genetics and Genomics

    Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios

    Marc J Williams, Luis Zapata ... Trevor A Graham
    Measurement of the distribution of fitness effects of new mutations arising in human oesophagus and skin, via new mathematical theory linking dn/ds values and fitness coefficients.
    1. Computational and Systems Biology
    2. Neuroscience

    A model for focal seizure onset, propagation, evolution, and progression

    Jyun-you Liou, Elliot H Smith ... LF Abbott
    Usage-dependent inhibition breakdown and neural adaptation underpins the key spatiotemporal dynamics of human focal seizures.
    1. Computational and Systems Biology
    2. Neuroscience

    Selectivity to approaching motion in retinal inputs to the dorsal visual pathway

    Todd R Appleby, Michael B Manookin
    Cells in the primate retina show unexpected sensitivity to approaching motion and optical flow.
    1. Biochemistry and Chemical Biology
    2. Computational and Systems Biology

    Structure-based discovery of potent and selective melatonin receptor agonists

    Nilkanth Patel, Xi Ping Huang ... Vsevolod Katritch
    Large scale virtual screening using recently solved structures of Melatonin receptors yield discovery of 10 new high-affinity selective agonists, also revealing novel functional features, including biased signaling at Melatonin receptors.
    1. Computational and Systems Biology
    2. Immunology and Inflammation

    The naive T-cell receptor repertoire has an extremely broad distribution of clone sizes

    Peter C de Greef, Theres Oakes ... Rob J de Boer
    Combining experiments, bioinformatics, and mathematical modelling, we find large heterogeneity in naive T cell clone sizes.
    1. Computational and Systems Biology

    Synthetic and genomic regulatory elements reveal aspects of cis-regulatory grammar in mouse embryonic stem cells

    Dana M King, Clarice Kit Yee Hong ... Barak A Cohen
    The independent effects of transcription factor binding sites are large regardless of sequence context, but the interactions between sites are context dependent.