October 2026

Cover articles

    1. Neuroscience

    Neurosecretory connections

    Theresa H McKim, Jayati Gera ... Meet Zandawala
    1. Developmental Biology

    Mapping regulatory DNA

    Gillian Forbes, Emilia Skafida ... Mathilde Paris
    1. Cell Biology
    2. Developmental Biology

    Bruce-mediated growth control

    Natsuki Shinoda, Yutaro Hama ... Masayuki Miura

Highlights controls:

Research articles

    1. Neuroscience

    Psilocybin asymmetrically modulates outcome-based choice and cortical processing under uncertainty

    David Jacobs, Alejandro Torrado Pacheco ... Bita Moghaddam
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Incomplete
    1. Neuroscience

    Glutamate receptor composition at Drosophila neuromuscular junctions depends on developmental stage and muscle identity

    Anne Sustar, Chengjie Qiu ... John C Tuthill
    Diverse combinations of glutamate receptor subunits are expressed across developmental stages and even between adjacent muscles in adult Drosophila.
    1. Neuroscience

    Oxytocin neurons signal state-dependent transitions from rest to thermogenesis and behavioral arousal

    Morgane Vandendoren, Jason G Landen ... Adam Nelson
    Oxytocin neurons couple physiological warming to behavioral arousal, revealing a homeostatic mechanism that coordinates transitions between low- and high-energy states.
    1. Neuroscience

    Compensation of hyperexcitability with simulation-based inference

    Daniel Müller-Komorowska, Tomoki Fukai
    Simulation-based inference predicts putative circuit mechanisms of hyperexcitability in a phenomenological microcircuit simulator with more than 30 free intrinsic and synaptic parameters.
    1. Cell Biology

    SVEP1 enables efficient binding of angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling

    Katharina Uphoff, Melina Hußmann ... Dörte Schulte-Ostermann
    The interaction of important signaling pathway members identified through in silico and in vitro approaches provides a model that suggests local receptor multimerization through bridging functions of various ligands.
    1. Neuroscience

    Distinct gradients of cortical architecture capture visual representations and behavior across the lifespan

    Xiayu Chen, Xingyu Liu ... Jesse Gomez
    A large-scale convergence gradient and a fine-scale divergence gradient in cortical architecture capture visual hierarchy, areal boundaries, and behavior, uncovering an undescribed retinotopic representation in anterior temporal cortex.
    1. Neuroscience
    2. Physiology

    Fitness level, but not sex, affects exercise-induced pain modulation

    Janne Ina Nold, Tahmine Fadai ... Christian Büchel
    Physical fitness may explain individual variability in exercise-related pain modulation, particularly for heat pain while sex may not substantially influence these responses across conditions.
    1. Neuroscience

    Whole-brain mapping of spinal-projecting neurons in larval zebrafish

    Martin Carbo-Tano, Kevin Fidelin ... Claire Wyart
    The supraspinal system of larval zebrafish has been described, uncovering spinal projections from the telencephalon, mesencephalon, and rhombencephalon, as well as numerous motor and neuromodulatory nuclei conserved with mammals.
    1. Biochemistry and Chemical Biology

    Lateral opening site of human oligopeptide transporter 2 plays a key role in the interaction with polymyxins

    Xukai Jiang, Yining Luo ... Jian Li
    Mapping the molecular interactions between polymyxins and hPepT2 enables rational design of safer lipopeptide antibiotics with reduced renal toxicity while retaining antibacterial activity.
    1. Neuroscience

    Revealing the benefit of eye motion for acuity under emulated cone loss

    Hannah K Doyle, James Fong ... Austin Roorda
    In the presence of emulated cone loss, eye movements are used to gather and integrate information, leading to improved letter acuity compared to a non-moving condition.
    1. Cancer Biology
    2. Cell Biology

    Molecular and functional analysis of calcium binding by a cancer-linked calreticulin mutant

    Ishmael Nii Ayibontey Tagoe, Amanpreet Kaur ... Malini Raghavan
    Endoplasmic reticulum and cytosolic calcium levels, and store-operated calcium entry, are comparable in calreticulin-deficient cells rescued with either wild-type calreticulin or the myeloproliferative neoplasm-linked Del52 mutant.
    1. Immunology and Inflammation

    Synthetic auxotrophy reveals metabolic regulation of plasma cell generation, affinity maturation, and cytokine receptor signaling

    Sung Hoon Cho, Shawna K Brookens ... Mark R Boothby
    Genetic and biochemical analyses reveal a way to overcome the metabolic flexibility of B cells and undermine their cytokine receptor signaling and differentiation into antibody-secreting cells, therapeutic targets in systemic lupus erythematosus (SLE).
    1. Neuroscience

    Ultrasound neuromodulation hypotheses on the directionality of effects and community resource

    Hugo Caffaratti, Ben Slater ... Chris Petkov
    An inTUS scientific resource is advanced to support evaluation of how low-intensity transcranial ultrasound can enhance or suppress neural function.
    1. Structural Biology and Molecular Biophysics

    Structural insights into peptidoglycan hydrolysis by the FtsEX system in Escherichia coli during cell division

    Jianwei Li, Yutong He ... Min Luo
    Structural and biochemical analyses reveal how E. coli FtsEX accommodates EnvC asymmetry to regulate amidase activation during bacterial cell division.
    1. Computational and Systems Biology
    2. Physics of Living Systems

    Out-of-balance growth enables cost-free synthesis of the flagellum and other proteins in a single bacterium

    Mayra Patricia Garcia Alcala, Josiah C Kratz, Philippe Cluzel
    Surprisingly, monitoring single bacteria expressing constitutive or flagellar genes reveals faster growth, a benefit driven by inherited, cost-free growth factors, whereas bulk measurements show an expected net fitness cost.
    1. Neuroscience

    Loose coupling between Ca2+ channels and release sensors as a synaptic correlate of higher-order brain function

    Grit Bornschein, Max Schwarze ... Hartmut Schmidt
    Identical pyramidal neuron synapses use distinct presynaptic calcium influx-transmitter release coupling architectures in prefrontal and primary somatosensory cortices, shaping synaptic properties to support area-specific cortical functions.
    1. Ecology
    2. Genetics and Genomics

    Plasticity associated with adoption of social roles in clown anemonefish

    Lili F Vizer, Douglas Alvarado ... Pete Buston
    During the establishment of size-based dominance hierarchies in clown anemonefish, an individual's social context shapes its growth trajectory through coordinated changes in feeding behavior, aggressive behaviors, and gene expression.
    1. Biochemistry and Chemical Biology

    Cell cycle-coupled CK1δ turnover, autoinhibition, and activity

    Fidel Emmanuel Serrano, Bianca Ruppert ... Michael Brunner
    In light of recent observations of how CK1δ is dynamically regulated, kinase activity and abundance are also regulated throughout the cell cycle primarily through phosphorylation at the C-terminal tail.
    1. Cell Biology
    2. Physiology

    Primary cilia in the growing limb are preferentially orientated, uncoupled from centriolar position

    Theana Johnson, Swati Midha ... Angus KT Wann
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    • Incomplete
    1. Ecology
    2. Microbiology and Infectious Disease

    Tracking West Nile virus dynamics using viral loads from trapped mosquitoes

    Punya Alahakoon, Ian Marchinton ... James A Hay
    Mosquito-pool Ct values reflect biologically meaningful variation in viral load, while integrating viral kinetics improves prevalence estimates and helps distinguish potentially infectious from non-infectious mosquitoes.
    1. Developmental Biology
    2. Neuroscience

    foxQ2 marks fast-acting interneurons including dopaminergic neurons of mushroom bodies and central complex in the beetle Tribolium castaneum

    Ying Pang, Bastian Klußmann-Fricke ... Gregor Bucher
    In insects, foxQ2 is part of the genetic code that specifies neurons contributing to the higher-order brain centers, including dopaminergic and other fast-acting neurons.
    1. Developmental Biology

    Light-entrained chromatin priming poises rapid metamorphosis in a marine sponge

    Huifang Yuan, Oceane Blard ... Sandie M Degnan
    Planetary and habitat-specific environmental cues combine to induce rapid and extensive changes in chromatin state and gene expression necessary for larval settlement and metamorphosis in the marine sponge Amphimedon queenslandica.
    1. Cell Biology

    A GCN1-independent activator of the kinase GCN2

    JiaYi Zhu, Giulia Emanuelli ... Stefan J Marciniak
    GCN2 can be pharmacologically activated independently of GCN1, revealing flexibility in the mechanisms governing kinase activation.
    1. Developmental Biology
    2. Genetics and Genomics

    Integration of ATAC- and RNA-sequencing identifies chromatin and transcriptomic signatures in classical and non-classical zebrafish osteoblasts and indicates mechanisms of entpd5a regulation

    Kleio Petratou, Martin Stehling ... Stefan Schulte-Merker
    Computational analyses of large datasets and molecular dissection reveal the promoter organisation of the osteoblast marker entpd5a and suggest novel regulators of osteogenesis.
    Version of Record
    Research Article
    • Fundamental
    • Compelling
    • Convincing
    1. Neuroscience

    A Spatiotemporal Hierarchy for Social Interaction Perception in the Lateral Visual Stream

    Emalie McMahon, Elizabeth Jiwon Im ... Leyla Isik
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Incomplete
    1. Neuroscience

    Open source laser-scanning photostimulation for neuroscience with Zapit

    Michael Lohse, Oliver M Gauld ... Robert AA Campbell
    A validated, open design brings programmable non-invasive photostimulation of multiple cortical areas in behaving mice to labs without expertise in optics or software design.
    1. Ecology
    2. Plant Biology

    Genetic canalization of nutrient resorption in the widespread grass Phragmites australis under salt stress

    Lele Liu, Wenyi Sheng ... Weihua Guo
    Salinity does not alter nutrient resorption efficiency, which is instead shaped by phylogeographic history and latitude.
    1. Cell Biology

    Small brown planthopper infestation enhances it reproduction and insecticide tolerance by manipulating glucose distribution and levels in rice

    Hainan Zhang, Qi Zhang ... Jianjun Wang
    Small brown planthopper infestation drives rice glucose redistribution to boost its own reproduction and insecticide tolerance.
    1. Neuroscience

    The transcription factor BCL11A restores differentiation potential to aged oligodendrocyte progenitor cells

    Tanay Ghosh, Roey Baror ... Robin JM Franklin
    gSWITCH identifies dynamic lineage switch genes and reveals BCL11A as an evolutionarily conserved regulator whose restoration rescues age-impaired oligodendrocyte progenitor cell differentiation.
    1. Biochemistry and Chemical Biology

    SARS-CoV-2 main protease inhibition through dimerization promotion by peptidomimetic inhibitors and disruption by ebselen

    Chengxi Liu, Qinyu Jia ... Zhong-Ping Yao
    Distinct effects of peptidomimetic inhibitors and ebselen on SARS-CoV-2 main protease dimerization reveal new strategies for antiviral drug design.
    1. Structural Biology and Molecular Biophysics

    Improved cryo-EM reconstruction of sub-50 kDa complexes using 2D template matching

    Kexin Zhang, Timothy Grant, Nikolaus Grigorieff
    High-resolution structural information can be recovered from proteins well below the conventional cryo-electron microscopy size range, substantially extending the range of complexes accessible to structural analysis.
    1. Developmental Biology
    2. Neuroscience

    Heterogeneous responses to embryonic critical period perturbations within the Drosophila larval locomotor circuit

    Niklas Krick, Jacob J Davies ... Matthias Landgraf
    Within the locomotor network of the Drosophila embryo, connected elements, from premotor interneuron to muscle, respond differentially to a critical period perturbation, suggesting a sequence of adjustment.
    1. Medicine

    Mid-zone hepatocytes trade proliferation for survival via Atf4-Chop axis in early acute liver injury

    Yaying Zhu, Chengxiang Deng ... Zhao Shan
    Mid-zone hepatocytes transiently pause proliferation through the Atf4-Chop-Btg2 axis to prioritize survival over regeneration during early acute liver injury.
    1. Neuroscience

    Modulation of human dorsal root ganglion neuron excitability by Nav1.7 inhibition

    Akie Fujita, Sooyeon Jo ... Bruce P Bean
    Inhibition of Nav1.7 sodium channels in human dorsal root ganglion neurons had larger effects to reduce threshold and upstroke velocity of action potentials compared to Nav1.8 inhibition but smaller effects to reduce repetitive firing of action potentials.
    1. Microbiology and Infectious Disease

    Mycobacterium tuberculosis suppresses protective Th17 responses during infection

    Alex Zilinskas, Amir Balakhmet ... Sarah A Stanley
    Mycobacterium tuberculosis uses its type VII secretion system and surface lipid phthiocerol dimycocerosate to suppress protective host Th17 cell responses.
    1. Immunology and Inflammation

    An IL-21R STAT hypomorph circumvents functional redundancy in germinal centre responses

    Christoph Jandl, Joanna Warren ... Cecile King
    An IL-21 receptor mutation that differentially regulates STAT1 and STAT3 activation influenced the differentiation of T follicular cells.
    1. Neuroscience

    Large language models poorly capture how word order shapes representations of sentence meaning in the human brain

    James Fodor, Carsten Murawski, Shinsuke Suzuki
    Representations from models that explicitly encode semantic roles (who did what to whom) align better with activity in language regions of the brain than representations from transformers do.
    1. Neuroscience

    Morphology and ultrastructure of pharyngeal sense organs of Drosophila larvae

    Vincent Richter, Tilman Triphan ... Andreas S Thum
    Comprehensive ultrastructural reconstruction of the Drosophila larval pharyngeal sensory system reveals the organization and diversity of its sensory structures and enables future investigations into sensory processing, feeding decisions, and behavior.
    1. Neuroscience

    Mapping the topographic organization of the human zona incerta using diffusion MRI

    Roy AM Haast, Jason Kai ... Jonathan C Lau
    Showing that the structural connectivity between the zona incerta and cortex is organized along a rostral–caudal axis.
    1. Genetics and Genomics

    Scale dependence decouple life history traits from transposable element evolution in sauropsids

    Yun Liang, Bin Zuo, Yan-Bo Sun
    Not revised
    Reviewed Preprint v1
    • Important
    • Incomplete
    1. Neuroscience

    Motor unit mechanisms of speed control in mouse locomotion

    Kyle Thomas, Rhuna Gibbs ... Samuel J Sober
    Recording the spiking activity of muscle fibers at high resolution in awake, behaving mice, reveals that locomotor speed is driven by highly variable subsets of motor units.
    1. Computational and Systems Biology
    2. Neuroscience

    Olfactory combinatorial coding supports risk–reward decision-making in Caenorhabditis elegans

    Md Zubayer Hossain Saad, William G Ryan ... Bruce A Bamber
    An odorant is encoded in the periphery as independent inputs of attractive and repulsive valence, which are then integrated and balanced to drive overall chemotactic behavior.
    1. Structural Biology and Molecular Biophysics
    2. Neuroscience

    Synaptic Organization of Surface AMPARs Changes by Brain Region and Tauopathy

    Rohit M Vaidya, Jiahao Zhang ... Paul R Selvin
    Not revised
    Reviewed Preprint v1
    • Important
    • Incomplete
    1. Ecology

    Novel but stable endosymbionts have contrasting effects on aphid dispersal and plant feeding damage in the cereal pest Diuraphis noxia

    Xinyue Gu, Alex Gill ... Ary Hoffmann
    Naturally occurring bacterial endosymbionts can modify population growth, crop damage, and dispersal in the Russian wheat aphid, a major pest of cereal crops, highlighting their potential for sustainable pest management.
    1. Neuroscience

    Complementary stable and dynamic prelimbic ensembles encode learned threat value underlying generalization and discrimination

    Marc E Normandin, Pedro M Ogallar ... Isabel A Muzzio
    Stable and dynamic prelimbic neurons preserve threat-generalization gradients despite ensemble turnover, supporting enduring representations of stimulus significance rather than freezing.
    1. Neuroscience

    A mechanistic theory of planning in prefrontal cortex

    Kristopher T Jensen, Peter T Doohan ... Timothy E Behrens
    Recently discovered sequence representations in prefrontal cortex can be combined with the ubiquitous principle of neural attractor dynamics to support planning in complex environments.
    1. Neuroscience

    Strong mnemonic prediction errors increase cognitive control, attention, and arousal

    Alice M Xue, Jenna Jokhani ... Anthony D Wagner
    Violations of strong memory-based predictions trigger a cascade of changes in cognitive control, attention, and arousal, with differential impacts on the encoding of unexpected information into memory.
    1. Cell Biology

    p66Shc mediates SUMO2-induced endothelial dysfunction

    Jitendra Kumar, Shravan K Uppulapu ... Santosh Kumar
    SUMO2ylation of redox protein p66Shc drives endothelial dysfunction by promoting oxidative stress, identifying a potential therapeutic target for cardiovascular disease.
    1. Immunology and Inflammation

    Role of gut epithelial-cell derived transglutaminase 2 in the formation of celiac disease autoantibodies

    Runa I Løberg, Helena A Abdi-Dezfuli ... M Fleur du Pré
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Neuroscience
    2. Stem Cells and Regenerative Medicine

    An integrated human forebrain organoid reveals microglia-mediated CD8+ T cell recruitment and neuroimmune dysfunction in Alzheimer’s disease pathology

    Yilin Feng, Feifei Yu ... Shaohua Ma
    Human forebrain organoids reveal that amyloid-driven microglia recruit killer T cells via CCL5, forming a self-amplifying neuroinflammatory loop targetable by CCR5 or CXCR3 blockade.
    1. Neuroscience

    Multiplexed CRISPRi reveals a transcriptional switch between KLF activators and repressors in the maturing neocortex

    Ryan W Kirk, Liwei Sun ... Sacha B Nelson
    In mammalian neocortex, opposing Krüppel-like factor (KLF) transcription factors first activate and then repress a genetic program related to axon outgrowth, potentially contributing to loss of cortical axon outgrowth in the adult.
    1. Cell Biology

    The microtubule-associated proteins CKAP2 and its paralog CKAP2-Like control ciliogenesis in human cells

    Luiz E da Silva, Gabriel Campolina-Silva ... Susanne Bechstedt
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    • Incomplete
    1. Neuroscience

    A reinforcement learning framework for goal-directed stimulation of engineered neuronal networks

    Benedikt Maurer, Vaiva Vasiliauskaitė ... Stephan J Ihle
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    1. Neuroscience

    Theta phase and theta-gamma coupling organise the spoken language network

    Haya Akkad, Daniel Bush ... Jenny Crinion
    Not revised
    Reviewed Preprint v1
    • Useful
    • Incomplete
    1. Cell Biology
    2. Immunology and Inflammation

    Syntaxin11 deficiency inhibits CRAC channel priming to suppress cytotoxicity and gene expression in T lymphocytes independent of membrane trafficking

    Sritama Datta, Abhikarsh Gupta ... Monika Vig
    Syntaxin11 directly controls a novel step in the activation of calcium channels, which helps activate genes and kill infected cells by a process distinct from moving cargo inside cells.
    1. Cell Biology
    2. Developmental Biology

    Bruce suppresses autophagy-regulated caspase activity and wing tissue growth in Drosophila

    Natsuki Shinoda, Yutaro Hama ... Masayuki Miura
    The activity of Dcp-1, one of Drosophila executioner caspases, is selectively regulated by the autophagy–Bruce axis, which enables distinct non–lethal functions for promoting tissue growth independent of cell death.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    A Sterol-Binding Cavity Underlies Sterol Recognition and Differential Activation of the ABCG5/G8

    Fatemeh Rezaei, Isra F Omar ... Jyh-Yeuan Lee
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    1. Genetics and Genomics
    2. Evolutionary Biology

    Cross-Kingdom Control: Yeast Prion Protein [MRPL10+] Modulates Host Physiology in Drosophila

    Chih-Chun Janet Lin, Jessica Y Jiang ... Andrew G Clark
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    • Incomplete
    1. Evolutionary Biology

    Fitness flux in SARS-CoV-2 and influenza H3N2

    Trevor Bedford
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Incomplete
    1. Developmental Biology
    2. Neuroscience

    Glia regulate local retinoic acid levels to specify neuronal specialisation for high-acuity vision

    Manuela Lahne, Roxana Lungu ... Ryan B MacDonald
    Not revised
    Reviewed Preprint v1
    • Important
    • Incomplete
    1. Neuroscience

    In vivo virus-free lineage tracing and live imaging reveal that NeuroD1 does not reprogram microglia into neurons

    Xiaoyu Li, Yuxin Li ... Yanxia Rao
    Genetic lineage tracing and live-cell imaging demonstrate that NeuroD1 does not convert microglia into neurons but instead promotes microglial apoptosis, challenging claims of in situ glia-to-neuron conversion.
    Version of Record
    Short Report
    • Important
    • Compelling
    1. Chromosomes and Gene Expression
    2. Genetics and Genomics

    Separable downmodulation of meiotic axis protein deposition and DNA break induction at chromosome ends

    Adhithi R Raghavan, Kieron May ... Andreas Hochwagen
    Meiotic axis protein deposition and double-strand break formation near yeast chromosome ends are regulated by multiple distinct layers of regulation, including the chromatin modifiers Sir2/3 and Dot1.
    1. Genetics and Genomics
    2. Physiology

    RiboTRAP-seq identifies spatially distinct functions for the anterior and posterior intestine in immune and metabolic regulation in Caenorhabditis elegans

    Chung-Chih Liu, Nicolas Seban, Supriya Srinivasan
    Specialized anterior intestinal cells in Caenorhabditis elegans act as sentinels, regulating pathogen responses and linking food availability to gut peptide secretion through pyruvate metabolism.
    1. Neuroscience

    Individual dopaminergic neurons induce unique, yet overlapping combinations of behavioural modulations, including safety learning, memory retrieval, and acute locomotion

    Naoko Toshima, Arman Behrad ... Michael Schleyer
    Carrying 'teaching' signals and modulating movement, two highly conserved functions of the dopaminergic system across all animals, are brought about by the same individual dopaminergic neurons in an insect larva.
    1. Neuroscience

    Domain-general computational integration in the Sense of Agency

    Amir Harduf, Ophir Netzer ... Roy Salomon
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Neuroscience

    Curriculum learning for complex tasks

    Tsvetomira Dumbalska, Kinsey Yuen ... Christopher Summerfield
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    • Incomplete
    1. Neuroscience

    Inhibitory Control, Shifting, and Working Memory Updating Domains form Cognitive Phenotypes in Non-human Primates

    Xuan Wen, Leo Malchin ... Thilo Womelsdorf
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Neuroscience

    Pharmacogenetic manipulation of Locus coeruleus activity in monkeys demonstrates its role in cognitive effort

    Pauline Perez, Sebastien Bouret
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Incomplete
    1. Neuroscience

    Foveated metamers of the early visual system

    William Broderick, Gizem Rufo ... Eero Simoncelli
    Perceptual metamers reveal that the visual system averages luminance over a spatial extent four times smaller than spectral energy, but such estimates depend critically on experimental design choices.
    1. Plant Biology

    The petal identity gene PhDEF has a major binding and regulatory action in the epidermis

    Emma Désert, Quentin Cavallini-Speisser ... Marie Monniaux
    A petal identity factor mostly acts in the epidermis to regulate its target genes.
    1. Genetics and Genomics
    2. Evolutionary Biology

    Phylogenomics of free-living neobodonids reveals they are a paraphyletic group from which all other metakinetoplastids are descended

    Daryna Zavadska, Julia A Packer ... Daniel J Richter
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    1. Physics of Living Systems

    Salmonids elicit an acute behavioral response to heterothermal environments

    Robert Naudascher, Stefano Brizzolara ... Roman Stocker
    Juvenile brown trout rapidly respond to fine-scale temperature disturbances, demonstrating behavioral mechanisms that support resilience to sudden thermal disruptions in freshwater ecosystems.
    1. Biochemistry and Chemical Biology

    NUDT2 loss defines quantitative limits for dinucleoside polyphosphate action on the cGAS–STING–TBK1 axis

    Paul Weiland, Renuka Dharani Shivakumar ... Gert Bange
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    1. Physics of Living Systems

    Mechanics and fate stochasticity shape stem cell distribution in tissues

    Johannes C Krämer, Edouard Hannezo, Jens Elgeti
    Not revised
    Reviewed Preprint v1
    • Useful
    • Solid
    1. Neuroscience

    Reduced dorsal CA1 activity limits retention of the temporal component of declarative memory in the Cntnap2 knockout mouse model of autism

    Elise Caitlin Rawlinson, Michael Hugh McCullough ... Nathalie Dehorter
    Restoring hippocampal CA1 activation during temporal gaps is sufficient to rescue long-term memory in a mouse model of autism.
    1. Biochemistry and Chemical Biology

    Gluconeogenic compensation renders glycogen phosphorylase non-essential as an insecticidal target in Plutella xylostella

    Yifei Zhou, Yanqi Kang ... Jiyuan Liu
    Gluconeogenesis rescues insects from glycogen phosphorylase suppression, establishing metabolic redundancy as a key consideration for insecticide target selection.
    1. Cell Biology
    2. Immunology and Inflammation

    Allosteric disulfide control of ligand binding and endocytosis of KIR2DL4, the natural killer cell receptor for HLA-G

    Sumati Rajagopalan, Joyce Chiu ... Eric O Long
    Allosteric transition between two disulfide configurations of NK cell receptor KIR2DL4 is a functional switch that controls receptor residence at the cell surface for binding and internalization of soluble HLA-G.
    1. Cancer Biology

    JAK-STAT pathway heterogeneity governs immunotherapy response in breast cancer

    Jianbo Zhou, Heng Zhang ... Fu Peng
    Multi-omics investigation identifies cell-type JAK-STAT heterogeneity as a predictive biomarker for PD-1 blockade in breast cancer.
    1. Physics of Living Systems

    Anatomy and mechanics of tsetse fly blood feeding

    Stephan Löwe, Laura Hauf ... Markus Engstler
    A saw-like proboscis, forceful pulling movements, and precise targeting of softer skin sites allow tsetse flies to draw blood from remarkably diverse vertebrate hosts.
    1. Neuroscience

    Designing optimal perturbation inputs for system identification in neuroscience

    Mikito Ogino, Daiki Sekizawa ... Masafumi Oizumi
    Passive recordings miss patterns of brain activity that fade before they can be observed, but perturbations designed to re-excite those patterns make estimates of neural connections far more accurate.
    1. Cell Biology
    2. Neuroscience

    Endosome-associated Rab GTPases control distinct aspects of neural circuit assembly

    Katherine X Dong, Yanbo Zhang ... Colleen N McLaughlin
    Systematic dissection of Rab GTPase function in developing neurons reveals that early and recycling endosome-associated Rabs regulate largely distinct aspects of neuronal morphogenesis and circuit assembly across developmental time.
    1. Neuroscience

    A framework for analyzing global Caenorhabditis elegans neural activity

    Iulia Rusu, Zachary T Cecere ... Sreekanth H Chalasani
    Computational and theoretical analyses reveal that Caenorhabditis elegans whole-brain activity can be represented in an 8-dimensional hyperbolic manifold that hierarchically links sensory ON/OFF inputs to motor states, providing a compact geometric framework for how a nervous system processes sensory information.
    1. Neuroscience
    2. Computational and Systems Biology

    A theory-guided model maps four recurrent modes of fear-goal arbitration across learning and relapse in rats

    Bin Yin, Jiaojiao Rao, XT (XiaoTian) Wang
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Incomplete
    1. Neuroscience

    Spatiotemporal Dissociation of Human Amygdala Response to Negative Affect

    Ke Bo, Martin A Lindquist ... Tor D Wager
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    1. Developmental Biology

    Wnt/beta-catenin signaling regulates Vascular Endothelial Growth Factor (VEGF) receptors in central nervous system endothelial cells

    Yanshu Wang, Ningyu Zhu ... Jeremy Nathans
    Not revised
    Reviewed Preprint v1
    • Important
    • Solid
    • Incomplete
    1. Cell Biology

    Whole human organ clearing and multimodal mapping

    Héloïse Policet-Bétend, Tomàs Jordà-Siquier ... Christophe M Lamy
    Not revised
    Reviewed Preprint v1
    • Important
    • Compelling
    1. Computational and Systems Biology

    Penumbria: Advanced 3D cell segmentation for biomedical imaging

    Laurids Stockert, Joseph Donovan, Herwig Baier
    Not revised
    Reviewed Preprint v1
    • Useful
    • Incomplete
    1. Chromosomes and Gene Expression

    Genome-wide mapping of Cas9-induced sister chromatid exchange across single and over 200 genomic sites in human cells

    Peter Chovanec, Shiyang He, Yi Yin
    Sci-L3-Strand-seq uncovers sister chromatid exchange as a frequent hidden outcome of Cas9-induced breaks, revealing genome-editing consequences that are invisible to conventional sequencing, and can be associated with structural variations.
    1. Structural Biology and Molecular Biophysics

    Large-scale prospective evaluation of co-folding across hundreds of Mac1–ligand complexes and three virtual screens

    Jongbin Kim, Galen J Correy ... James S Fraser
    Co-folding methods accurately place and rank ligands within an optimization series, yet fail to separate true binders from docking false positives, suggesting complementary roles in drug discovery.
    1. Neuroscience

    Synaptic vesicle undocking induces low-frequency depression

    Melissa Silva, Federico F Trigo ... Alain Marty
    Low-frequency depression, an understudied form of synaptic plasticity, is proposed to reflect a reorganization of synaptic vesicles inside the readily releasable pool.
    1. Neuroscience

    Robust and replicable effects of ageing on resting-state brain electrophysiology measured with MEG

    Andrew J Quinn, Jemma Pitt ... Mark W Woolrich
    Resting-state MEG reveals a replicable, full-frequency profile of ageing that offers a foundation for comparing and validating brain health biomarkers although detecting specific effects requires careful consideration of statistical power.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    Product-stabilized filamentation by human glutamine synthetase allosterically tunes metabolic activity

    Eric Greene, Richard Muniz ... James S Fraser
    Glutamine drives its own synthetase to assemble into inhibitory filaments, linking product concentration directly to a conformational switch that gates the active site.
    1. Neuroscience

    Synaptic connectome of a neurosecretory network in the Drosophila brain

    Theresa H McKim, Jayati Gera ... Meet Zandawala
    Connectome-level analysis of the Drosophila neuroendocrine system reveals the organizational logic by which the brain integrates sensory information to regulate hormonal signaling.
    1. Developmental Biology

    Svep1 orchestrates distal airway patterning and alveolar differentiation in murine lung development

    Nicole Foxworth, Julie Wells ... Maria Loscertales
    Genetic and functional analyses identify SVEP1 as an extracellular matrix regulator that coordinates airway branching, smooth muscle differentiation, and alveolar maturation during lung development.
    1. Chromosomes and Gene Expression
    2. Genetics and Genomics

    Gene function and expression profiling in yeast spores, killifish diapause embryos, and their post-dormant offspring cells

    Shaimaa Hassan, Maria Rodriguez-López ... Jürg Bähler
    Not revised
    Reviewed Preprint v1
    • Important
    • Solid
    1. Structural Biology and Molecular Biophysics
    2. Microbiology and Infectious Disease

    Structures of LolB bound to LolA or lipoprotein resolve the final steps of bacterial lipoprotein trafficking

    Abigail E Jepson, Elise Kaplan ... Vassilis Koronakis
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    • Incomplete
    1. Biochemistry and Chemical Biology
    2. Evolutionary Biology

    Sequence adaptations satisfy the constraints of mitochondrial membrane protein evolution

    Tarun Yadav, Jonathan H Borowsky ... Jared Rutter
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Cell Biology
    2. Cancer Biology

    P95-HER2 promotes metastatic progression by biasing MRTFA dependent signaling

    Joseph D Fernandes, Erin Bresnahan ... Joshua C Snyder
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Computational and Systems Biology
    2. Microbiology and Infectious Disease

    Obtaining maximum information from colony counts with REPOP

    Pedro Pessoa, Carol Yunxiao Slayton ... Steve Presse
    Conventional colony counting obscures bacterial population structure by conflating biological heterogeneity with stochastic noise from dilution and plating, which can be separated by explicitly modeling the measurement process.
    1. Biochemistry and Chemical Biology

    A membrane-disruptive action of VBIT-4 challenges its role as a widely used VDAC1 oligomerization inhibitor

    Varun Ravishankar, Luís Borges-Araújo ... Lucie Bergdoll
    VBIT-4 perturbs lipid membranes without detectably affecting VDAC1 channels or oligomerization, calling for careful interpretation of its biological effects and highlighting the need to assess membrane interactions of hydrophobic compounds.
    1. Computational and Systems Biology

    Role of desolvation on biomolecular liquid–liquid phase separation

    Kai Zhang, Zhiyu Peng ... Wei Wang
    A desolvation-aware coarse-grained framework enables efficient and physically realistic modeling of biomolecular phase separation by capturing water-mediated effects on phase behavior, dense-phase packing, conformational reorganization, and dynamics.
    1. Microbiology and Infectious Disease

    The structural context of mutations in proteins predicts their effect on antibiotic resistance

    Anna G Green, Mahbuba Tasmin ... Maha Reda Farhat
    Spatial clustering of mutations in Mycobacterium tuberculosis proteins finds proteins that are involved in antibiotic resistance, and predicts which mutations cause resistance.
    1. Genetics and Genomics
    2. Neuroscience

    Starvation transforms signal encoding in C. elegans thermoresponsive neurons and suppresses heat avoidance via bidirectional glutamatergic and peptidergic signaling

    Saurabh Thapliyal, Parvathi Sushama Gopinath, Dominique A Glauser
    Nutritional state dynamically reshapes sensory processing to prioritize behavioral responses, revealing the plastic coupling of sensation, internal state, and behavior.
    1. Cancer Biology
    2. Evolutionary Biology

    Punctuated mutagenesis promotes multi-step evolutionary adaptation in human cancers

    Christopher J Graser, Wenbo Wu ... Franziska Michor
    Evolutionary modeling reveals that punctuated bursts of mutations facilitate fitness-valley crossing in cancer, promoting multi-step adaptation across complex fitness landscapes.
    1. Neuroscience

    Deep anatomical and ultrastructural classification of neurons in the zebrafish olfactory bulb

    Nila R Mönig, Michał Januszewski ... Rainer W Friedrich
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    1. Neuroscience

    Evidence for flexible regulation of movement and decision vigor in a reward-oriented task

    Adrien Conessa, Arnaud Boutin, Bastien Berret
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    • Incomplete
    1. Neuroscience

    Small circuit principles for learning in large worlds

    Dhruva V Raman, Christopher R Dunne ... Timothy O’Leary
    Not revised
    Reviewed Preprint v1
    • Important
    • Incomplete
    1. Neuroscience

    Two Interacting Neural Processes Support Speech Planning during Naturalistic Conversation

    Hiroyoshi Yamasaki, Philippe Blache, Daniele Schön
    Not revised
    Reviewed Preprint v1
    • Useful
    • Incomplete
    1. Biochemistry and Chemical Biology
    2. Genetics and Genomics

    Genome-wide synthetic lethality screen of Bam complex-associated genes in Escherichia coli

    Jack A Bryant, Kara A Staunton ... Manuel Banzhaf
    High-throughput genetics reveals all synthetic-lethal relationships for outer membrane protein biogenesis associated genes in Escherichia coli.
    1. Neuroscience

    Circadian photoreceptor CRYPTOCHROME promotes wakefulness under short winter-like days via a GABAergic circuitry

    Lixia Chen, Danya Tian ... Luoying Zhang
    The circadian photoreceptor CRYPTOCHROME selectively inhibits sleep under short winter day length by tuning down GABAergic tone within pacemaker neuron network.
    1. Cell Biology

    Photo-downregulation of SIRT4 mitigates aging in mice by enhancing H3K9ac via fatty acid metabolism

    Fangqing Deng, Rong Yang ... Lianbing Zhang
    Periodic red-light irradiation promotes coupling between keratinocyte mitochondrial lipid metabolism and epigenetic remodeling, increasing acetyl-CoA availability and histone H3 lysine 9 acetylation to slow skin aging.
    1. Cell Biology

    Early recruitment of membrane-bound DNaseX to phagocytic cups in macrophages

    Arghajit Pyne, Vivek Pandey ... Xuefeng Wang
    Phagocytic cups of macrophages exhibit strong DNase activity during the early stage of phagocytosis, prior to cup closure.
    1. Genetics and Genomics

    A pleiotropic EPAS1 enhancer mediating Tibetan adaptation to hypoxia is active in adipocytes

    Alexis G Thornburg, Soo-Young Park ... Marcelo A Nóbrega
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    1. Immunology and Inflammation

    Heterogeneity and ontogeny of mouse thymic macrophages reveal a requirement for Csf1r-expressing myeloid cells during early T cell development

    Helen Wang, Vinothkumar Rajan ... Juan Carlos Zúñiga-Pflücker
    Two thymic macrophage subsets differ in developmental origin and specialize in apoptotic-cell clearance or immune signaling, linking the thymic myeloid niche to progression through the early β-selection-associated checkpoint.
    1. Evolutionary Biology

    Large scale loss-of-function mutations during chicken evolution and domestication

    Siwen Wu, Kun Wang ... Zhengchang Su
    Not revised
    Reviewed Preprint v1
    • Useful
    • Incomplete
    1. Cell Biology

    Golgi CATCHR complexes function as organizing hubs for vesicle tethering and fusion

    Walter S Aragon-Ramirez, Amrita Khakurel ... Vladimir V Lupashin
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Convincing
    • Incomplete
    1. Structural Biology and Molecular Biophysics

    On the Polymorph-Selection Determinants of α-Synuclein Amyloid Fibrils Studied at Atomic Resolution

    Lukas Frey, David Rhyner ... Jason Greenwald
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Ecology

    Scanning and active sampling behaviours emerge from conserved insect neural circuits

    Cody A Freas, Antoine Wystrach
    Diverse insect movement behaviours, from scans, pirouettes, and loops to sweeping oscillations, can emerge from conserved neural circuits, with forward speed balancing goal-directed travel against exploratory sampling.
    1. Chromosomes and Gene Expression

    Cell-cycle-resolved Hi-C reveals unexpected plasticity of A/B compartments across interphase

    Linda Choubani, Hisashi Miura ... Ichiro Hiratani
    Nuclear A/B compartments are dramatically remodeled by S‑phase entry and weaken in G2, revising the model of cell‑cycle chromatin dynamics and placing G1/S as a key transition.
    1. Immunology and Inflammation
    2. Computational and Systems Biology

    Uncertainty-aware quantitative analysis of the structure and dynamics of T cell receptor repertoires

    Simo Kitanovski, Kai Wollek, Daniel Hoffmann
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    1. Neuroscience

    Hippocampal and prefrontal contributions to memory-guided navigation depend on task epoch

    Tora Dohi, Lucy Anderson ... Ipshita Zutshi
    Not revised
    Reviewed Preprint v1
    • Useful
    • Incomplete
    1. Neuroscience

    Top-down processing alone activates the early somatosensory nuclei

    Paige Howell, Lynn Farner ... Sanne Kikkert
    Not revised
    Reviewed Preprint v1
    • Important
    • Convincing
    1. Cell Biology

    A high-throughput assay for the measurement of Ca2+ oscillations and insulin release from uniformly sized mouse β-cell (MIN6) spheroids

    Stijn Robben, Patricia Davidson ... Thomas Voets
    High-throughput monitoring of glucose-evoked calcium oscillations in uniform 3D β-cell spheroids enables efficient discovery of compounds that enhance insulin secretion.
    1. Immunology and Inflammation
    2. Microbiology and Infectious Disease

    Human CD1c-autoreactive T-cells recognise Mycobacterium tuberculosis-infected antigen-presenting cells and display cytotoxic effector programmes

    Matthew Milton, Sahar H Farag ... Salah Mansour
    CD1c-autoreactive T-cells couple infection-associated lipid recognition with cytotoxic and antimicrobial activity, revealing a previously underappreciated arm of human immunity to tuberculosis.
    1. Genetics and Genomics
    2. Physiology

    NK2R signaling governs intestinal lipid mobilization and mucosal inflammation

    Pedro A Perez, Chung-Chih Liu ... Supriya Srinivasan
    NK2R is a molecular switch linking tachykinin signaling to intestinal lipid handling, mucosal inflammation and gut microbiota, positioning NK2R-targeted peptide therapeutics for cardiometabolic and inflammatory bowel diseases.
    1. Neuroscience

    Limitations of pupil diameter as a proxy for modes of locus coeruleus activity

    Lowell W Thompson, Joshua I Gold
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    1. Neuroscience

    Neurofeedback enhances a neural signature of selective attention to speech in cocktail-party settings

    Ram K Pari, Marina Inyutina ... Benedikt Zoefel
    Not revised
    Reviewed Preprint v1
    • Important
    • Solid
    1. Neuroscience
    2. Computational and Systems Biology

    Reassessing Choice Probability: What 59 Macaque Studies Tell Us About Decision-Related Activity in Visual Cortex

    Anton Pletenev, Richard T Born ... Ralf M Haefner
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Solid
    1. Microbiology and Infectious Disease
    2. Structural Biology and Molecular Biophysics

    Distinct allosteric remodeling of HIV-1 Env dynamics on virions by gp41-directed antibodies reveals two modes of neutralization

    Wang Xu, Narendra Kumar Gonepudi ... Maolin Lu
    Antibodies can target multiple conformational states of the HIV envelope to block viral entry, broadening the mechanisms underlying neutralization.
    1. Microbiology and Infectious Disease

    The type VI secretion system governs strain maintenance in a wild mammalian gut microbiome

    Beth A Shen, Kyle L Asfahl ... Joseph D Mougous
    A type VI secretion system transferred between gut bacteria via a mobile genetic element stabilizes its native host strain, but yields only transient benefits in a new species.
    1. Neuroscience

    Mapping human visual contrast sensitivity and vision loss across the visual field with model-based fMRI

    Hugo T Chow-Wing-Bom, Matteo Lisi ... Tessa M Dekker
    Model‑based fMRI contrast‑sensitivity mapping provides a fixation‑tolerant, large‑field measure of cortical visual function that sensitively detects, localizes, and tracks visual field loss and recovery.
    1. Biochemistry and Chemical Biology

    A Sequential Assembly Mechanism for Stable Cdc13 Dimerization on Telomeric DNA

    Po-Wei Chiu, Yu-Ting Lin ... Jing-Jer Lin
    Not revised
    Reviewed Preprint v1
    • Important
    • Solid
    1. Developmental Biology

    Genome-wide discovery of cis-regulatory elements in a large genome

    Gillian Forbes, Emilia Skafida ... Mathilde Paris
    Integrating genome-wide maps of chromatin accessibility and sequence conservation provides an accessible low-cost approach for identifying cis-regulatory elements in large genomes, validated in the emerging model Parhyale.
    1. Physiology

    Sex-biased expression of enteroendocrine cell-derived hormones contributes to higher fat storage in Drosophila females

    Puja Biswas, Elizabeth J Rideout
    Sex-specific regulation of enteroendocrine hormones shapes energy storage differently in male and female flies.
    1. Developmental Biology

    Bidirectional redistribution of actomyosin drives epithelial invagination in ascidian siphon tube morphogenesis

    Jinghan Qiao, Pengyu Yu ... Bo Dong
    Bidirectional relocation of actomyosin as a novel mechanism drives invagination in developing organs.
    1. Neuroscience

    A cortical–hippocampal communication undergoes rebalancing after new learning

    Arron F Hall, Dong V Wang
    The anterior cingulate cortex selectively reorganizes communication with superficial CA1 neurons during sharp-wave ripples to balance memory consolidation following new learning.
    1. Neuroscience

    Negative affect influences the computations underlying food choice in bulimia nervosa

    Blair RK Shevlin, Loren Gianini ... Laura A Berner
    In bulimia nervosa, negative affect exaggerates a taste-before-health bias in food decision-making, and this bias is associated with more frequent out-of-control eating.